Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1188 ATGAGAAGAAGGTCACAACGCGAGGTTCTTAGATTGAATTTTGCATCTAGAAATAGTTTCTATGTTTTGCTAAATCTTGTGGACATGAGGAAAGAAAACATTGGATCTTCAAAAGCTGCAGAGCTTCCTGGTCGCTTGACTCGTGCACGAGCTGCTGCATTTCGCGCAAATGGACAGCTACCACCTATCAAGGAGTCAACACAACAAAATCGGAAGCCATTAAGAGCTAACCCAAAAAGAGCAGCTTCTGATCAAATATGTCCCCAGCCTAAAAAGAGGGCTGTTCTTCAGGATGTTTCCAATGTTTTCTGTGAAAATTCATATAGGAACTGTTTCAATGCTTCTAAAATTCAGGCTAAGAAAAGCAAGCTGACTAAAACTGGTCAAGGCAATATTTCCAGAGAAGTTCCTTCAGTTTCTGGGAAGCTGCCACAGCTTCAAGTTGACTTGCAACCTAAGAGTTTGCCTGAAACAGGACTTTTATCAGAAGAGGCTAATGGTACCTGTTCAAGTAATTTTGCAGATAATGCCCTCCATCAGACAAGTGGCAACAAAGTGTGCAGCACAAACGATGGTCTGCTTGGAGGGCAGACTCCTGGATTATGTCCTCAGCCACTGATTTCTCAAACAAAAGCCAAGAGAATTTGCCTTTCTGAACCTTCAAGTGCATCAAAGAATGAAGACGTTATTAATATAGATGCTGATCATGAAGATCCTCAATTGTGCAGTGATTATGCTGTTGATATCTACAACAATTTACGTGTTTATGAGCTTGCAAGAAGACCTTGTACTGACTTTATGGAAACAGTTCAGCGAGATATCACTCAAAGCATGCGTGGGATATTAGTTGACTGGCTTGTAGAGGTTTCTGAGGAGTACAAATTGGTTCCAGATACTCTATACCTGACTGTATATCTCATAGACTGGTTTCTCTCCAAAAATTACATTGAAAGACAAAAGCTTCAGCTACTTGGCATCACCTGCATGCTGATTGCTTCGAAGCACGAAGAAATTTGTCCTCCGCGGATTGATGATTTCTGCTTCATCACTGATAACACTTATACAAAAGAAGAGGTACTTAAAATGGAGACTCAAGTGGTGAAGTGTTCCGAATTTCAAATGTTTGCTCCCACAACAAAAACTTTCCTCAGGCGGTTTCTTCGAGCAGCGCAAGCTACTTACAAGTGTCCTAGCCTTGAATTGGAATACCTGGCCAATTATCTTGCTGAACTAAGCCTGATGGACTATAGTTTCTTGACTTTCCTTCCTTCACTCACTGCTGCATCAGCTGTGTTTCTTGCTAGATGGACATTGGATCAGTCATATCACCCTTGGAATCCAACTCTTGAACACTATTCAAGATATAAGGCATCAGATTTAAAAGCCACAATTGTTGCATTGCAAGATCTGCAATTGAATACCAAAGGCTGCCCTTTAAGCGTCATTCGGATGAAGTACAGACAAGACAAGTTCAAAAATGTGGCTGCCATGTCTTCGCCAATACTGCTTGAAACTCTGTTCTGA 1524 0.4127 MRRRSQREVLRLNFASRNSFYVLLNLVDMRKENIGSSKAAELPGRLTRARAAAFRANGQLPPIKESTQQNRKPLRANPKRAASDQICPQPKKRAVLQDVSNVFCENSYRNCFNASKIQAKKSKLTKTGQGNISREVPSVSGKLPQLQVDLQPKSLPETGLLSEEANGTCSSNFADNALHQTSGNKVCSTNDGLLGGQTPGLCPQPLISQTKAKRICLSEPSSASKNEDVINIDADHEDPQLCSDYAVDIYNNLRVYELARRPCTDFMETVQRDITQSMRGILVDWLVEVSEEYKLVPDTLYLTVYLIDWFLSKNYIERQKLQLLGITCMLIASKHEEICPPRIDDFCFITDNTYTKEEVLKMETQVVKCSEFQMFAPTTKTFLRRFLRAAQATYKCPSLELEYLANYLAELSLMDYSFLTFLPSLTAASAVFLARWTLDQSYHPWNPTLEHYSRYKASDLKATIVALQDLQLNTKGCPLSVIRMKYRQDKFKNVAAMSSPILLETLF 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1188 507 Gene3D - 262 375 - -
Mibi11g1188 507 PANTHER CYCLINS 218 458 IPR039361 -
Mibi11g1188 507 FunFam Mitotic cyclin 6 262 362 - -
Mibi11g1188 507 SUPERFAMILY Cyclin-like 377 498 IPR036915 -
Mibi11g1188 507 CDD CYCLIN 377 455 IPR013763 -
Mibi11g1188 507 SUPERFAMILY Cyclin-like 237 374 IPR036915 -
Mibi11g1188 507 Gene3D - 248 496 - -
Mibi11g1188 507 CDD CYCLIN 278 367 IPR013763 -
Mibi11g1188 507 PIRSF Cyclin_A_B_D_E 32 506 IPR039361 -
Mibi11g1188 507 FunFam Cyclin A1 364 496 - -
Mibi11g1188 507 Pfam Cyclin, N-terminal domain 248 373 IPR006671 -
Mibi11g1188 507 SMART cyclin_7 284 368 IPR013763 -
Mibi11g1188 507 SMART cyclin_7 381 469 IPR013763 -
Mibi11g1188 507 SMART Cyclin_C_2 377 500 IPR004367 -
Mibi11g1188 507 MobiDBLite consensus disorder prediction 56 88 - -
Mibi11g1188 507 Pfam Cyclin, C-terminal domain 377 499 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1188 Mibi-ChrMibi11 29179870 29186061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1188 29 507 Core Cell Cycle Gene Families AT1G80370 53.719 6.45e-170 486