Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1126 ATGATTCTTCCTCGCTCTGAAAAGAAAGAAACAGCTTTCCAGAGTGGTGGAACAATAGGAGAATCTGATTTTGTTTCCTGGGTGGGGTTGATTGGTCAGAAGAAGGGTATGGCTTTTTGCCCAATCTTTTGTTTTGGAAAGGGTTCAGATCGCAAAGGACGTGGGAAGGCACAACCAACATGGCGAGTCTTTTCCTTAAAGGAGCTACACTCAGCTACAAATAATTTCAATTATGATAATAAACTTGGAGAAGGGGGATTTGGCAGTGTTTACTGGGGCCAGCTTTGGGATGGATCACAAATTGCAGTGAAAAGATTGAAAGTTTGGAGCAACAAAGCAGATATGGAATTTGCTGTTGAAGTTGAGATATTGGCTAGAGTTCGACACAAGAATCTTCTTAGTCTACGGGGCTATTGTGCTGAAGGACAGGAACGGTTAATTGTATATGATTATATGCCGAATTTGAGCTTACTCTCTCATCTTCATGGACAGCACTCAGCAGAATGCCTTCTGGATTGGAGCAGACGGATGAGTATTGCAATCGAATCAGCAGAGGGAATCGCATATCTCCACCACCAAGCAACCCCACACATAATCCACAGAGATATTAAAGCAAGCAATGTGCTGTTGGATGCAGATTTCCGGGCTCAGGTTGCAGATTTTGGTTTTGCTAAGTTGATCCCTGAGGGTGCGACACATGTGACTACGAGAGTTAAGGGCACACTTGGCTATCTCGCACCTGAGTATGCCATGTTAGGTAAAGCATCAGAGAGTTGTGATGTTTACAGTTTTGGAATTCTTTTGCTGGAACTTACGAGTGGCAGGAAACCAATTGAAAAACTAAGTGCAACGGTGAAGCGGCCAATAACCGATTGGGCACTGCCATTGGTTTTTGAGAAGAAATTTAGTGAAATTGCAGATCCAAAACTAAATGGTAACTATGTGGAGGAAGATCTTAAAAGGGTTGTTTATGTTGCACTTGTTTGTGCTCAGAATCAGCCTGAGAAGAGACCCAACATGCTGGAAGTGCTAGAGCTTTTGAAAGGAGAGTCTAAAGTTAAGTTTTCTCAATTAGAAAATCATGAACTTTTTAGAAGTTCTCAATCTGCTGATTCCAATGACGACAGCATACAAGCTGCTGAAGATAATTCAGACTTCATATCAGCAAAAGACGAATCAAAACCTGAGTTGAAGGAGAACCCTGAGCCATAG 1212 0.4224 MILPRSEKKETAFQSGGTIGESDFVSWVGLIGQKKGMAFCPIFCFGKGSDRKGRGKAQPTWRVFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKADMEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNLSLLSHLHGQHSAECLLDWSRRMSIAIESAEGIAYLHHQATPHIIHRDIKASNVLLDADFRAQVADFGFAKLIPEGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELTSGRKPIEKLSATVKRPITDWALPLVFEKKFSEIADPKLNGNYVEEDLKRVVYVALVCAQNQPEKRPNMLEVLELLKGESKVKFSQLENHELFRSSQSADSNDDSIQAAEDNSDFISAKDESKPELKENPEP 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1126 403 CDD STKc_IRAK 82 349 - -
Mibi11g1126 403 MobiDBLite consensus disorder prediction 364 403 - -
Mibi11g1126 403 ProSiteProfiles Protein kinase domain profile. 76 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g1126 403 FunFam PTI1-like tyrosine-protein kinase At3g15890 152 363 - -
Mibi11g1126 403 Gene3D Transferase(Phosphotransferase) domain 1 152 364 - -
Mibi11g1126 403 ProSitePatterns Protein kinases ATP-binding region signature. 82 104 IPR017441 GO:0005524
Mibi11g1126 403 MobiDBLite consensus disorder prediction 385 403 - -
Mibi11g1126 403 Pfam Protein tyrosine and serine/threonine kinase 78 346 IPR001245 GO:0004672|GO:0006468
Mibi11g1126 403 FunFam PTI1-like tyrosine-protein kinase At3g15890 48 151 - -
Mibi11g1126 403 MobiDBLite consensus disorder prediction 364 383 - -
Mibi11g1126 403 Gene3D Phosphorylase Kinase; domain 1 49 151 - -
Mibi11g1126 403 SMART serkin_6 76 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g1126 403 ProSitePatterns Serine/Threonine protein kinases active-site signature. 198 210 IPR008271 GO:0004672|GO:0006468
Mibi11g1126 403 SUPERFAMILY Protein kinase-like (PK-like) 58 347 IPR011009 -
Mibi11g1126 403 PANTHER OS01G0253100 PROTEIN 52 352 IPR045271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1126 Mibi-ChrMibi11 28500997 28503745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1126 64 378 Trihelix Transcription Factor Family AT1G70460 46.584 1.72e-94 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Mibi11g1126 Pkinase 9.3e-43 CL0016