Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1122 ATGAACTTTTTAAACCGACACTTTTCACCAATCCGGGAGCGTTTACCAAATACCAATTCACACAATGGTGAATTTACCATTTTAACCCTCTTAATTTTCGCATCCTCATCTTCCTGGCGAAATAGCCCTCTCTCCACCACAGCTTATTATCTATGGGGCCCCACTTCTCCTGGCGAATACTTTTCCTATAATGCCCTTCCTTTTCTATTTTCAGATCCTACCATTTCAAAACATGATCAAATTCAAGTTCTTCTTCTTCTCCTCCTCCTTCTAGAAATTATTCAGATTCTTCACACCATTTCTATGGCCGTTGTTTCTCTCTCTCTTCAACCTTATCTCCATCCCTCTTCCGCTCCTTCTTCTTCTTCTTCTTCGTCTTCTTTTTTATGTGGTAGTCTCCAGCTTCGGTCACATAAGAACTTCTTCAATATCCAATATCCTTCCCATTTTTCTACTTTGACATTAAATTCTACGCCCTCCTCGAGGAGATTCCGGACGGCGATTTTCGCTTCTGGGGATTATTATGCGACTCTTGGAGTCTCCAAATCCGCGACTAATAAGGAGATTAAGGCGGCTTATCGGAAGTTAGCTCGTCAGTACCATCCTGATGTGAACAAGGAACCTGGAGCTATTGACAAGTTCAAGGAAATTAGTGCTGCTTATGAGGTTCTATCAGATGATAAAAAGAGGGCTTTGTATGATCAATACGGAGAGGCTGGTGTTAAGAGTGCAGTCGGAGGAGGATCAAATGCTTACACGACTAATCCATTTGATTTGTTTGAGACATTTTTCGGGCCAAGTATGGGCGGCTTTGCGGGCATGGATCCAACTGGATTTGGAACAACCCGCCGCCGTAGCACTGTTACTAAGGGTGAAGACATTCGTTATGATATTTTGTTGGAATTTTCTGAGGCAATTTTTGGAACTGAAAAGGAATTTGAGCTTTCCCATTTGGAAAAATGCGAAGCTTGTAATGGTACTGGAGCAAAGGTTGGCTCCAAAATGAGAATATGTTCGACTTGTGGTGGGAGGGGTCAGGTGATGAGGACTGAACAAACACCTTTCGGTTTATTCTCACAGGTTTCAATTTGTCCAAATTGTGGAGGGGATGGTGAAATCATATCTGAATTTTGTAGAAAATGTAATAGTGAAGGACGTATTCGGGTTAAGAAAATTATTAAAGTCAAAGTTCCTCCAGGGGTTAGCTCGGGCAGTATTCTGAGAGTTGCTGGGGAGGGTGATGCTGGACCTCGAGGGGGTCGTCCTGGAGATCTGTTTGTATATCTTGAGGTGCAAGAGATTCCAGGAATTCAAAGAGATGGCATTAATCTCACTTCAACGATAACAATCAGTTATTTGGATGCCATACTAGGGGTTGTCGTCAAGGTAAACACAGTTGAAGGCATTTCTGAATTACAAATTCCCCCAGGTACCCAACCTGGCGATGTCCTTGTCCTTGAAAGGAAAGGTGTGCCAAAATTGAACAAGCCATCAATACGCGGTGACCACTTATTTGCAGTTAAAGTTACAATACCAAAACGTATCAGTTCAAAGGAGCGTGAGTTGCTTGAAGAAATTGCTTCAAGAGGCAGCAAAACAAGTAGCCCTTCAAAACCCCGTCCCAGCAGCATCCACTCTTCCAAGGGAAGGGCTGAAAATCCTGTAGCTCAAAGTGCTGAAAGTTCAAAAGTGGTCGAAGAGAAAACTGAACAGTCAGAAGATCAAGATGACGTATGGAACAAATTAAAGAATTTTGCCGGGTCGGTTGCAAATGGAGCTCTGAAGTGGCTAAAAGATAACCTGTAA 1806 0.4275 MNFLNRHFSPIRERLPNTNSHNGEFTILTLLIFASSSSWRNSPLSTTAYYLWGPTSPGEYFSYNALPFLFSDPTISKHDQIQVLLLLLLLLEIIQILHTISMAVVSLSLQPYLHPSSAPSSSSSSSSFLCGSLQLRSHKNFFNIQYPSHFSTLTLNSTPSSRRFRTAIFASGDYYATLGVSKSATNKEIKAAYRKLARQYHPDVNKEPGAIDKFKEISAAYEVLSDDKKRALYDQYGEAGVKSAVGGGSNAYTTNPFDLFETFFGPSMGGFAGMDPTGFGTTRRRSTVTKGEDIRYDILLEFSEAIFGTEKEFELSHLEKCEACNGTGAKVGSKMRICSTCGGRGQVMRTEQTPFGLFSQVSICPNCGGDGEIISEFCRKCNSEGRIRVKKIIKVKVPPGVSSGSILRVAGEGDAGPRGGRPGDLFVYLEVQEIPGIQRDGINLTSTITISYLDAILGVVVKVNTVEGISELQIPPGTQPGDVLVLERKGVPKLNKPSIRGDHLFAVKVTIPKRISSKERELLEEIASRGSKTSSPSKPRPSSIHSSKGRAENPVAQSAESSKVVEEKTEQSEDQDDVWNKLKNFAGSVANGALKWLKDNL 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1122 601 MobiDBLite consensus disorder prediction 528 562 - -
Mibi11g1122 601 FunFam Putative Mitochondrial DnaJ chaperone 379 427 - -
Mibi11g1122 601 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 123 533 - -
Mibi11g1122 601 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 308 388 IPR036410 -
Mibi11g1122 601 FunFam Chaperone protein dnaJ A6 chloroplastic 321 385 - -
Mibi11g1122 601 Gene3D DnaJ domain 170 275 IPR036869 -
Mibi11g1122 601 MobiDBLite consensus disorder prediction 563 578 - -
Mibi11g1122 601 ProSiteProfiles Zinc finger CR-type profile. 308 390 IPR001305 GO:0031072|GO:0051082
Mibi11g1122 601 CDD DnaJ_zf 321 385 IPR001305 GO:0031072|GO:0051082
Mibi11g1122 601 Pfam DnaJ central domain 321 385 IPR001305 GO:0031072|GO:0051082
Mibi11g1122 601 CDD DnaJ 173 226 IPR001623 -
Mibi11g1122 601 Gene3D - 437 529 - -
Mibi11g1122 601 Pfam DnaJ domain 173 234 IPR001623 -
Mibi11g1122 601 Gene3D - 321 385 - -
Mibi11g1122 601 PRINTS DnaJ domain signature 229 248 IPR001623 -
Mibi11g1122 601 PRINTS DnaJ domain signature 209 229 IPR001623 -
Mibi11g1122 601 PRINTS DnaJ domain signature 175 193 IPR001623 -
Mibi11g1122 601 PRINTS DnaJ domain signature 193 208 IPR001623 -
Mibi11g1122 601 CDD DnaJ_C 292 515 - -
Mibi11g1122 601 SUPERFAMILY HSP40/DnaJ peptide-binding domain 289 443 IPR008971 GO:0006457|GO:0051082
Mibi11g1122 601 SUPERFAMILY Chaperone J-domain 171 279 IPR036869 -
Mibi11g1122 601 FunFam Molecular chaperone Hsp40/DnaJ family protein 437 529 - -
Mibi11g1122 601 FunFam Chaperone protein dnaJ A6 chloroplastic 170 276 - -
Mibi11g1122 601 SMART dnaj_3 172 229 IPR001623 -
Mibi11g1122 601 ProSiteProfiles dnaJ domain profile. 173 237 IPR001623 -
Mibi11g1122 601 ProSitePatterns Nt-dnaJ domain signature. 214 233 IPR018253 -
Mibi11g1122 601 Gene3D - 291 427 - -
Mibi11g1122 601 TIGRFAM DnaJ_bact: chaperone protein DnaJ 173 528 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Mibi11g1122 601 Pfam DnaJ C terminal domain 294 512 IPR002939 -
Mibi11g1122 601 SUPERFAMILY HSP40/DnaJ peptide-binding domain 438 523 IPR008971 GO:0006457|GO:0051082
Mibi11g1122 601 Hamap Chaperone protein DnaJ [dnaJ]. 170 585 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Mibi11g1122 601 MobiDBLite consensus disorder prediction 526 578 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1122 Mibi-ChrMibi11 28378801 28384458 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1122 174 280 C2H2 Transcription Factor Family AT1G74250 36.842 3.86e-09 57.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi11g1122 11 28378801 28384458 Mibi11g1122 11 28378801 28384458 ECH