Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1097 ATGGATCACACCCCCTCTTCTATCCCCCACCACCATCATCCGGAAATAGATGATGATCATCATCATCAGTGCATCTTCAATCACATCCATTCAACCTCTTTTGATGAAGATGAGTTGTTCGGTGACACGTTTCATCAAACAGGGGTAAGTCTCTGTTCCCAAGGTGATTCAGCTCACAACTTCTCCTCCACCCTCACCGGCGCCGGCGGCAACCTATTCTTCAATAACATCTCAAACCGGCCGGTAGCTTCAGCATTTACTTTGTCTTTTGATAGCTCAACCATAATACCCATCATGGGCGAAACACCATATCCCACCACTAAATCCAAGTGTTTGTCACTTGACCGAACCCGATCCACACGTAATAGTAGACCCAGAAGCAAATCAAGATCTTCCTCTGAAGTTGTACATCACATTATGGCTGAGAGGAAGAGAAGACAGGATCTTACTCAGAAGTTCATAGCACTTGCTGCTACTATCCCTGGCTTGAAGAAGATGGACAAGGCGACTGTACTTTGTGAGGCTATCAATCACGTGAAGCGCCTTCAAGAGAAAGTGAGGGAGTTAGAGAACAATGTTCAAGAAAAGAGGAAGAGAAATAATGGAAGAACGATGAGGAAAGAGAAAAATAATAAAAGGGAATTATGTTGGCGTGGTCGGAGAGCACAGGAAGAAGAAGATGTTGAATTTTCAGAAATGGAAGTGAAGGTGACAGAGAATCAAGTTCTGATTCGGATTCAGTGTGAGAAACGACCAGATATGATGCTTCATTTGACTGACATTCTTCAACATGTTCATCTCTCTGTCTTGTGTTGTAGCTCTCTTGCTTTTGGTAACTCTGCTTCTAGCATCACCATTGTTGCTCAGATGAAGGAAGAATACAACATGAAGGTGAATGATTTACTCAAGTATTTGAGGCAGCATCTGTTCAAGTCCCATGATGTTCGGTAG 951 0.4332 MDHTPSSIPHHHHPEIDDDHHHQCIFNHIHSTSFDEDELFGDTFHQTGVSLCSQGDSAHNFSSTLTGAGGNLFFNNISNRPVASAFTLSFDSSTIIPIMGETPYPTTKSKCLSLDRTRSTRNSRPRSKSRSSSEVVHHIMAERKRRQDLTQKFIALAATIPGLKKMDKATVLCEAINHVKRLQEKVRELENNVQEKRKRNNGRTMRKEKNNKRELCWRGRRAQEEEDVEFSEMEVKVTENQVLIRIQCEKRPDMMLHLTDILQHVHLSVLCCSSLAFGNSASSITIVAQMKEEYNMKVNDLLKYLRQHLFKSHDVR 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1097 316 SMART finulus 139 188 IPR011598 GO:0046983
Mibi11g1097 316 Coils Coil 172 199 - -
Mibi11g1097 316 MobiDBLite consensus disorder prediction 107 137 - -
Mibi11g1097 316 MobiDBLite consensus disorder prediction 114 137 - -
Mibi11g1097 316 Coils Coil 221 241 - -
Mibi11g1097 316 PANTHER BHLH TRANSCRIPTION FACTOR 21 312 - -
Mibi11g1097 316 Pfam Helix-loop-helix DNA-binding domain 136 183 IPR011598 GO:0046983
Mibi11g1097 316 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 133 182 IPR011598 GO:0046983
Mibi11g1097 316 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 136 201 IPR036638 GO:0046983
Mibi11g1097 316 Gene3D - 124 200 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1097 Mibi-ChrMibi11 27980068 27982628 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1097 118 309 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 37.000 2.15e-33 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi11g1097 HLH 3e-08 No_clan