Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1094 ATGGAAAAAGACCCTCTTTTAAGAGAGAAGAACTCGGATCAAGATAATGAAGAATTATCAGATGGAGAGTGTTTTCTTAGAGATATCCTACAGGACCATCCATCTAATTTATGTTCAAATAGTAAAGCCATTTTGGCTCCGACCACCACCGTGGCGGCAGACGGCGGCGCCACCACCCACTCCGCCGTGGGTGCTTCTGAAACAACAACAACAACAACACCTCCAACCACATGCGTTCTTTCTTTTGATAAGTCCATTGTAATGCCAGAGATTTTGGAAGACCCTTGTTATTATCATTATAATAGTAATAATACGAATAATTCGTATCAGATCAAAGACAATTCCTTGAAGGCCAAACGGAGCATTGATATGATTAATGATGAGCCACCGGTGAGCAGAGGGACAAAGAGGTCAAGAAGTGGTGCTGAGGCAACAGATCATATAATGGCTGAGAGAAGAAGGAGACAGGAACTCACTGAAAGGTTCATGTCTCTTTCTGCCACCATCCCTGGCTTGAAAAAGGTTCAAACTTCTTCTTAA 540 0.4259 MEKDPLLREKNSDQDNEELSDGECFLRDILQDHPSNLCSNSKAILAPTTTVAADGGATTHSAVGASETTTTTTPPTTCVLSFDKSIVMPEILEDPCYYHYNSNNTNNSYQIKDNSLKAKRSIDMINDEPPVSRGTKRSRSGAEATDHIMAERRRRQELTERFMSLSATIPGLKKVQTSS 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1094 179 MobiDBLite consensus disorder prediction 126 145 - -
Mibi11g1094 179 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 142 179 IPR011598 GO:0046983
Mibi11g1094 179 Gene3D - 119 179 IPR036638 GO:0046983
Mibi11g1094 179 PANTHER BHLH TRANSCRIPTION FACTOR 51 175 - -
Mibi11g1094 179 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 134 174 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1094 Mibi-ChrMibi11 27930826 27931365 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1094 75 179 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22750 37.838 3.59e-13 64.7