Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1085 ATGGCTAGACCTCAACAACGCTATCGAGGCGTCCGCCAAAGGCACTGGGGATCATGGGTTTCAGAAATCCGTCACCCCCTTCTGAAGACAAGAATATGGCTAGGAACATTCGAAACAGCGGAGGATGCAGCCAGAGCTTACGATGAAGCAGCAAGGCTAATGTGTGGAACAAAGGCAAGAACCAATTTTCCATTTAATCCCAATGAGCCACAATCATCTTCTTCAAAGTATCTCTCTGCAACTTTGACTGCAAAGCTTCATAAGTGCCACATGGCGTCACTTTCACTTCAAATGGGTAATAATAAGCAAAAACAGCCACAAGAACAAGAACAGATTCAAAGGGGTGACTATAATGAGAGTAATAGTAGCCAATTTGTCTCCGGCAATGTCATTGCTGGAACGAGTTCTGATGGGGGATTCAGGTGGCCAGAGATGAGACCTGAAGAAGATCAATGGGGATTTGAAGGGCAGGGTGAAGAAGTTGGACCAGTACTTGAAGATGATCACATTGAGCAGATGATTCAGGAATTGCTTCATTATGGTTCTATTGAGCTCTGTTCTTTTGGTTCAACCTAG 576 0.4462 MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGTKARTNFPFNPNEPQSSSSKYLSATLTAKLHKCHMASLSLQMGNNKQKQPQEQEQIQRGDYNESNSSQFVSGNVIAGTSSDGGFRWPEMRPEEDQWGFEGQGEEVGPVLEDDHIEQMIQELLHYGSIELCSFGST 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1085 191 MobiDBLite consensus disorder prediction 99 124 - -
Mibi11g1085 191 SMART rav1_2 7 70 IPR001471 GO:0003700|GO:0006355
Mibi11g1085 191 FunFam Ethylene-responsive transcription factor 2 6 66 - -
Mibi11g1085 191 SUPERFAMILY DNA-binding domain 7 65 IPR016177 GO:0003677
Mibi11g1085 191 PRINTS Ethylene responsive element binding protein signature 30 46 IPR001471 GO:0003700|GO:0006355
Mibi11g1085 191 PRINTS Ethylene responsive element binding protein signature 8 19 IPR001471 GO:0003700|GO:0006355
Mibi11g1085 191 CDD AP2 6 64 IPR001471 GO:0003700|GO:0006355
Mibi11g1085 191 Gene3D AP2/ERF domain 6 65 IPR036955 GO:0003700|GO:0006355
Mibi11g1085 191 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 6 113 - -
Mibi11g1085 191 ProSiteProfiles AP2/ERF domain profile. 7 64 IPR001471 GO:0003700|GO:0006355
Mibi11g1085 191 Pfam AP2 domain 7 56 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1085 Mibi-ChrMibi11 27834660 27835324 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1085 1 191 AP2-EREBP Transcription Factor Family AT5G25190 62.827 3.09e-71 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi11g1085 AP2 1.1e-11 CL0081