Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1077 ATGATTCTCCGTTCTTCTTTGGTCTGTTCCGAAACTTCATTGTTTGGTAAAAAAAAATCAATTCTCATGAGCAAGTGTCTCAGTGCTGAAGAATGGACCTTAGAAGAAGGAGGCTTAGCCAAAGTCTCTTGCTCATTGCCTACACCTCCTGTCCCGCTTGGAAGAAAGGTAGGAGCTGAGTTTGTAGGAACCTTAATTCTCATGTTTGCTGGTATTTCCACTGCTATTGTGAACCAAAGGACACCAGGTTCTGAGACTCTCATTGGGTGTGCTGCTTCTACCGGTCTTGCTGCTATGGTTGTCATCATTGCCACCGGTCATATCTCTGGTGCCCATCTCAACCCTGCAGTCACCATTTCCTTTGCTGTTTTGAAGCACTTCCCATGGAAACATGTTCCTGTATATATTGGCGCACAATTTTTGGCGTCCGTATCTGCAGCATTTGTATTAAAGGGGATACTTCACCCCTTCATGAGTGGAGGAGTTACAGTTCCTTCAGGAGGATATGCTCAAGCTTTTGCTTTAGAGTTCATCATCAGCTTTATTCTCATGTTTGTTGTCACAGCAGTGGCTACCGACACAAGAGCTGTGGGCGAGCTTGCTGGAATTGCAGTGGGAGCGACTGTTATGCTCAACATACTTATAGCTGGGCCAGCAACAGGAGGATCAATGAACCCAGTGAGAACATTAGGTCCAGCTATTGCTACAAGTAACTACAAAGACATATGGGTGTACCTCATTGCTCCTATCCTAGGAGCTCTTGGTGGGGCAGGAATCTACACTGCAGTCAAACTTCCAGAAGCGGAAGGTGAGACACAAGGAAATGCTTCAACACCGTGA 840 0.4595 MILRSSLVCSETSLFGKKKSILMSKCLSAEEWTLEEGGLAKVSCSLPTPPVPLGRKVGAEFVGTLILMFAGISTAIVNQRTPGSETLIGCAASTGLAAMVVIIATGHISGAHLNPAVTISFAVLKHFPWKHVPVYIGAQFLASVSAAFVLKGILHPFMSGGVTVPSGGYAQAFALEFIISFILMFVVTAVATDTRAVGELAGIAVGATVMLNILIAGPATGGSMNPVRTLGPAIATSNYKDIWVYLIAPILGALGGAGIYTAVKLPEAEGETQGNASTP 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1077 279 Pfam Major intrinsic protein 55 260 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi11g1077 279 PRINTS Major intrinsic protein family signature 131 150 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi11g1077 279 PRINTS Major intrinsic protein family signature 175 193 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi11g1077 279 PRINTS Major intrinsic protein family signature 206 228 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi11g1077 279 PRINTS Major intrinsic protein family signature 94 118 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi11g1077 279 PRINTS Major intrinsic protein family signature 243 263 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi11g1077 279 PRINTS Major intrinsic protein family signature 55 74 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi11g1077 279 SUPERFAMILY Aquaporin-like 52 269 IPR023271 -
Mibi11g1077 279 FunFam Aquaporin NIP2-1 43 275 - -
Mibi11g1077 279 ProSitePatterns MIP family signature. 112 120 IPR022357 -
Mibi11g1077 279 Gene3D Glycerol uptake facilitator protein. 48 277 IPR023271 -
Mibi11g1077 279 PANTHER AQUAPORIN NIP2-1 35 269 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1077 Mibi-ChrMibi11 27742417 27745234 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1077 19 269 Major Intrinsic Protein MIP AT1G80760 77.866 1.29e-134 381