Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1072 ATGGGTACTGAGCTGGACATAGATGAGGCTGTTGTTGCTGTTGAGACAGCTGCACCAAGTATTGGTGAGCCAATGGACATCATGACCGCCTTGCAGATGGTGCTGAGAAAATCACTGGCTTATGGCGGTCTTGCTCGCGGCCTCCATGAAGGCGCAAAGGTTATTGAAAAGCATGCTGCACAGCTCTGTGTTCTTGCTGAGGACTGTGACCAACCGGACTATGTTAAACTCGTCAAAGCGCTCTGTGCTGAGCACAGTGTTAGCTTGCTGACAATTCCTAATGCAAAAACCCTTGGAGAGTGGGCTGGTTTGTGTAAGATCGACTCGGAAGGGAAGGCCAGAAAGGTGGTTGGTTGCTCCTGTGTGGTTGTTGAGGATTTCGGAGAGGAACATGAAGCCTATAACGTTGTTTTGCAGCATGTTAAATCTCACTGA 435 0.492 MGTELDIDEAVVAVETAAPSIGEPMDIMTALQMVLRKSLAYGGLARGLHEGAKVIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHSVSLLTIPNAKTLGEWAGLCKIDSEGKARKVVGCSCVVVEDFGEEHEAYNVVLQHVKSH 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1072 144 FunFam 40S ribosomal protein S12 11 144 - -
Mibi11g1072 144 PRINTS Ribosomal protein S12E family signature 114 127 IPR000530 GO:0003735|GO:0005840|GO:0006412
Mibi11g1072 144 PRINTS Ribosomal protein S12E family signature 48 64 IPR000530 GO:0003735|GO:0005840|GO:0006412
Mibi11g1072 144 PRINTS Ribosomal protein S12E family signature 89 110 IPR000530 GO:0003735|GO:0005840|GO:0006412
Mibi11g1072 144 PRINTS Ribosomal protein S12E family signature 34 47 IPR000530 GO:0003735|GO:0005840|GO:0006412
Mibi11g1072 144 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 30 123 IPR004038 -
Mibi11g1072 144 SUPERFAMILY L30e-like 23 142 IPR029064 -
Mibi11g1072 144 ProSitePatterns Ribosomal protein S12e signature. 30 48 IPR000530 GO:0003735|GO:0005840|GO:0006412
Mibi11g1072 144 PANTHER 40S RIBOSOMAL PROTEIN S12 18 144 IPR000530 GO:0003735|GO:0005840|GO:0006412
Mibi11g1072 144 Gene3D - 11 144 IPR029064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1072 Mibi-ChrMibi11 27686232 27687479 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1072 21 144 Cytoplasmic Ribosomal Protein Gene Family AT2G32060 72.581 6.74e-66 195