Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1070 ATGGTGGGGCTAGTTCATGTGTTTCATGATTCCTTTATGATCAGATCTCTTTTGTGTGATATTCGTTCGCTGAAGAGTATTTTGTTTTTATTTTTGTCAGTATTAGACTCAGAAAGGAACAAGAAAACAGAGAATATGGCTGCCATTGGTTCAACATCTAGACAGCCGCAATTTATTGTGAGCACTGGAAATCGAAGCTCTTCCGATGCTCCTCTCATTGAAAACCCAGATACTGATCAAATTGTTGTCCCTGATAAAACAAGCTGGAAGAACTTATTTGCATATATGGGTCCTGGGTTTCTTGTTTCCATCGCATATATAGACCCAGGAAACTTTGAAACGGATCTTCAGGCAGGTGCTCAATATAAATATGAGTTACTTTGGATTATATTGGTGGCCTCTTGTGCTGCTCTTATAATTCAATCAATGGCAGCCAATTTAGGAGTCGTAACCGGAAAACATTTAGCAGAGCATTGTAAAACTGAGTATGCTCGTTCAACAAACTTCGTCTTATGGGTTATTGCTGAAATTGCCATAGTGGCTTGTGACATTCCAGAAGTGATCGGTACAGCCTTTGCGTTGAACATGCTCTTCAACATACCTGTTTGGATTGGTGTTCTTTTGACAGGGCTCAGTACATTGATCCTCTTAGCATTACAGCAATATGGGGTCAGGAAACTTGAGTTCTTGATTGCATTTCTGGTGCTTACTATTGCTGCGTGCTTTTTCGCTGAACTTGGGAATGCAAAGCCCGATGCGAAAGAGGTTTTAGAGGGTCTTTTTGTACCAAAACTCAAAGGGAATGGTGCTACTGGTCTTGCGATTTCACTCCTTGGGGCTATGGTTATGCCGCACAATCTCTTCCTCCACTCGGCTCTGGTGCTCTCTAGAAGAATACCCCGATCAGTTCATGGAATCAAAGAGGCTTGCAGATTTTACATGATAGAAAGTGCCTTTGCTCTTATGGTGGCTTTCCTTATAAATGTTTCTGTTATCTCCGTGAGTGGCTCAGTTTGCAATTCATCGAATTTGAATGCCGAAGATCAAGCGAGCTGTCAGGATTTGGACTTGAACAAAGCCTCCTTTCTATTAAAAAATGTACTTGGTAAATGGAGCTCAAAACTGTTCGCAATCGCCTTGCTTGCTTCAGGTCAAAGTTCAACTATAACAGGAACATATGCAGGGCAATATGTCATGCAGGGATTTCTTGATTTACGACTGAAACCATGGATTAGGAATTTTTTGACTCGTTGTTTAGCTATAGTCCCTAGTTTAATTGTTGCAGTCATAGGTGGCTCTGCCGGGGCTGGGAAGCTCATAATTATTGCATCGATGATCTTATCATTTGAGCTCCCGTTTGCTCTGATTCCACTCCTCAAGTTCACTAGCAGCAAAACCAAAATGGGCGCTTATGCCAACTCATTCACGATATCAGTTTTGACATGGATCATTGGTTCGTTGATAATGGCGATAAATATATACTACTTGGTGACCGGCTTTGTCAAGTTGCTTCTTCATAGTGACTTGAAAATGGTAGGTAAAGTGTTTGCGGGGATGTTAGGGTTTTCAGGCATAGCAGTTTATTTGGCAGGGATTGCTTATCTGGTTATTCGCAAGAACAAGAAGGCAACACATCTTCTGGCACTAACAACACCTGAAAGTAGACAAATGGAAAGTGAAGAAGGCAATGGATCTATGAATTGCCACCCAAGAGAAGACATAGTAAGCATGCAATTGCCTCAGAGAAGTGATTTAGCTGATCTCTAA 1767 0.4143 MVGLVHVFHDSFMIRSLLCDIRSLKSILFLFLSVLDSERNKKTENMAAIGSTSRQPQFIVSTGNRSSSDAPLIENPDTDQIVVPDKTSWKNLFAYMGPGFLVSIAYIDPGNFETDLQAGAQYKYELLWIILVASCAALIIQSMAANLGVVTGKHLAEHCKTEYARSTNFVLWVIAEIAIVACDIPEVIGTAFALNMLFNIPVWIGVLLTGLSTLILLALQQYGVRKLEFLIAFLVLTIAACFFAELGNAKPDAKEVLEGLFVPKLKGNGATGLAISLLGAMVMPHNLFLHSALVLSRRIPRSVHGIKEACRFYMIESAFALMVAFLINVSVISVSGSVCNSSNLNAEDQASCQDLDLNKASFLLKNVLGKWSSKLFAIALLASGQSSTITGTYAGQYVMQGFLDLRLKPWIRNFLTRCLAIVPSLIVAVIGGSAGAGKLIIIASMILSFELPFALIPLLKFTSSKTKMGAYANSFTISVLTWIIGSLIMAINIYYLVTGFVKLLLHSDLKMVGKVFAGMLGFSGIAVYLAGIAYLVIRKNKKATHLLALTTPESRQMESEEGNGSMNCHPREDIVSMQLPQRSDLADL 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1070 588 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 62 544 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mibi11g1070 588 Hamap Divalent metal cation transporter MntH [mntH]. 76 500 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mibi11g1070 588 Pfam Natural resistance-associated macrophage protein 112 474 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mibi11g1070 588 PRINTS Natural resistance-associated macrophage protein signature 171 197 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mibi11g1070 588 PRINTS Natural resistance-associated macrophage protein signature 274 297 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mibi11g1070 588 PRINTS Natural resistance-associated macrophage protein signature 384 403 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mibi11g1070 588 PRINTS Natural resistance-associated macrophage protein signature 224 245 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mibi11g1070 588 PRINTS Natural resistance-associated macrophage protein signature 199 218 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mibi11g1070 588 PRINTS Natural resistance-associated macrophage protein signature 412 429 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mibi11g1070 588 PRINTS Natural resistance-associated macrophage protein signature 444 463 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mibi11g1070 588 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 91 468 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1070 Mibi-ChrMibi11 27618674 27623474 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1070 61 582 Inorganic Solute Cotransporters AT1G15960 79.198 0.0 857