Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1069 ATGGCTGCCATTGGTTCAACATCTAGACAGCCGCAATTTATTGTGAGCACTGGAAATCGAAGCTCTTCCGATGCTCCTCTCATTGAAAACCCAGACACTGATCAAATTGTTGTCCCTGATAAAACAAGCTGGAAGAACTTATTTGCATATATGGGTCCTGGGTTTCTTGTTTCTATTGCATATATAGACCCAGGAAACTTTGAATCGGATCTTCAGGCAGGTGCACAATATAAATATGAGTTACTTTGGATTATATTGGTAGCCTCTTGTGCTGCTCTTATAATTCAATCAATGGCAGCCAATTTAGGAGTCGTAACCGGAAAACATTTAGCAGAGCATTGTAAAGCTGAGTACGCTCGTTCAACAAACTTCGTCTTATGGGTTATTGCTGAAATTGCCATAGTGGCTTGTGACATTCCAGAAGTGATCGGTACAGCTTTTGCGTTGAACATGCTCTTCAACATACCTATTTGGATTGGTGTTCTTCTAACAGGGCTTAGTACATTGATCCTCTTAGCTTTACAGCAATATGGGGTCAGGAAACTTGAGTTCGTGGTTGCATTTCTGGTGCTTACTATTGCTGCGTGCTTTTTCGCTGAACTTGGGTATGCAAAGCCCGATGCTAAAGAGGTTTTGCAGGGTCTTTTTGTACCGACACTCAAAGGGAATGGTTCTGCTGGTCTTGCGATTTCACTCCTTGGGGCTATGGTTATGCCGCACAATCTCTTCCTCCACTCGGCGCTGGTGCTCTCTAGAAGAATACCCCGATCAGTTCATGGAATCAAAGAGGCTTGCAGATTTTACATGGTAGAAAGTGCCTTTGCTCTTACGGTGGCTTTCCTCATAAATGTTTCTGTCATCTCCGTGAGTGGCTCAGTTTGCAATTCATCGAATCTGAACGCCAAAGATCAAGCGAGCTGTCTACATTTGGACTTGAACAAAGCCTCGTTTCTATTAAAAAATGTACTGGGTAAATGGAGTTCAAAACTGTTCGCGATCGCCTTGCTTGCTTCAGGTCAAAGTTCGACCATAACAGGAACATATGCAGGGCAATATGTCATGCAGGGATTTCTTGATTTACGACTGAAACCGTGGGTTAGGAATTTTTTGACTCGTTGTTTAGCTATAGTCCCTAGTTTAATTGTTGCAGCCATTGGTGGCTCTGCTGGGGCTGGGAAGCTCATAATTATTGCATCAATGATCTTATCATTTGAGCTCCCTTTTGCTCTGATTCCACTCCTCAAGTTCACTAGCAGCAAAACCAAGATGGGCGCTTATGCCAACTCATTCGCGATATCAGTTGTGACATGGATCATCGGTTCGCTGATAATGGCGATAAATATATACTACTTAGTGACCGGCTTTGTCAAGTTGCTTCTTCATAGTGAGTTGAAAATTGTGGGTAAGGTGTTTGTGGGGATATTAGGGTTTTCAGCCATAGCAGTATATTTGGCAGGGATCGTTTATCTGGTTATTCGCAAGAACAAGAAGGCAACACATCTTCTGGCACTAACAACACCTGAAAGTAGACAAATGGAAAGTGAAGAAGGCAATGAATCTATGAATTGCCACCCAAGAGAAGACATAGTAAGCATGCAATTGCCTCAGAGAAGTGATTTAACTGATCCCTGA 1632 0.4277 MAAIGSTSRQPQFIVSTGNRSSSDAPLIENPDTDQIVVPDKTSWKNLFAYMGPGFLVSIAYIDPGNFESDLQAGAQYKYELLWIILVASCAALIIQSMAANLGVVTGKHLAEHCKAEYARSTNFVLWVIAEIAIVACDIPEVIGTAFALNMLFNIPIWIGVLLTGLSTLILLALQQYGVRKLEFVVAFLVLTIAACFFAELGYAKPDAKEVLQGLFVPTLKGNGSAGLAISLLGAMVMPHNLFLHSALVLSRRIPRSVHGIKEACRFYMVESAFALTVAFLINVSVISVSGSVCNSSNLNAKDQASCLHLDLNKASFLLKNVLGKWSSKLFAIALLASGQSSTITGTYAGQYVMQGFLDLRLKPWVRNFLTRCLAIVPSLIVAAIGGSAGAGKLIIIASMILSFELPFALIPLLKFTSSKTKMGAYANSFAISVVTWIIGSLIMAINIYYLVTGFVKLLLHSELKIVGKVFVGILGFSAIAVYLAGIVYLVIRKNKKATHLLALTTPESRQMESEEGNESMNCHPREDIVSMQLPQRSDLTDP 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1069 543 Pfam Natural resistance-associated macrophage protein 67 429 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mibi11g1069 543 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 23 500 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mibi11g1069 543 MobiDBLite consensus disorder prediction 1 28 - -
Mibi11g1069 543 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 46 423 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mibi11g1069 543 Hamap Divalent metal cation transporter MntH [mntH]. 31 455 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mibi11g1069 543 MobiDBLite consensus disorder prediction 509 543 - -
Mibi11g1069 543 PRINTS Natural resistance-associated macrophage protein signature 229 252 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mibi11g1069 543 PRINTS Natural resistance-associated macrophage protein signature 367 384 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mibi11g1069 543 PRINTS Natural resistance-associated macrophage protein signature 126 152 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mibi11g1069 543 PRINTS Natural resistance-associated macrophage protein signature 399 418 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mibi11g1069 543 PRINTS Natural resistance-associated macrophage protein signature 154 173 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mibi11g1069 543 PRINTS Natural resistance-associated macrophage protein signature 179 200 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mibi11g1069 543 PRINTS Natural resistance-associated macrophage protein signature 339 358 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1069 Mibi-ChrMibi11 27609179 27614636 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1069 16 537 Inorganic Solute Cotransporters AT1G15960 77.481 0.0 841