Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1068 ATGGCCAGAGTCAACGAACAATCTCCAGATCAGAACCAAAACCACAACGACTTCCCCAGGAGTATTCTGTTCGACAAGTACGAGATGGGCAGGCAATTGGGTCAGGGAAATTTCGCCAAGGTCTACTACGCCAGAAACCTTGTCACCAACGAGAGTGTTGCTATTAAGGTCATCAAGAAAGAGAAGCTGAAGAAAGAAAGGTTAGTTAGACAGATCAAGCTAGAGGTCTCCGTGATGCGACTAGTAAGACATCCTCACATAGTTGAACTCAAAGAAGTCATGGCAACAAAAGGAAAAATCTTCCTAGTCATGGAATATGTCAAAGGAGGAGAATTATTCTCCAAGGTTGCTAAAGGGAAACTCAAGGAAGATGTAGCAAGGAAGTATTTCCAACAATTGATTAGCGCGATTGATTTTTGTCACAGCCGTGGGGTGACACATAGAGATCTGAAGCCTGAGAATTTGCTCCTTGATGAGAATGAAGATCTTAAGGTTTCCGATTTTGGGTTGTCGGCGTTGCCGGAACAGCGTCGATCCGATGGTATGTTGGTCACACCGTGTGGGACCCCGGCGTATGTAGCACCTGAGGTGTTGAAGAAAAAAGGGTATGATGGATCAAAGGCTGATATTTGGTCATGTGGTGTCATTCTCTATGCTCTGCTTTCTGGGTATTTACCATTTCAGGGTGAGAATATTATGAAGATTTACAAGAAGGCTTTCAAATCTGAGTACCAATTTCCGGATTGGATTTCACCTGAAGCTAAGAATTTGATCACCAATCTTTTAATTGCCGACCCAGAGAAGAGATATTCAATCCCAGATATCATGAAGGATCCATGGTTTCAGATCGGATTCATGAGGCCAATCGCTTTTTCGATTAAGAAGGAACCCGGTTTCGATTTCGACGAAGAAGAGAATGAAATTAAAGGAGAAGAAGCTGTGGTGAGATCAGAAGAGAAGCCAAGTAGGCCATTTTACAATGCGTTTGAGATAATATCTTCTTTGTCAAATGGGTTTGATCTGAGGAGTTTATTTGAGACAAGAAAGAGGTCGCCGTCGATGTTTCTTTCGAAGCTTTCGGCTCCTGTGGTGGTGTCAAAGCTGGAGTCTGTGGCGAAGAAGCTGAATTTTAGGATCACAGGGAAGAAGGATTTCAAGGTGAGGATGCAGGGGGAGACGGAGGGGAGGAAGGGGAAGCTGGCGATGACGGTGGAGGTGTTCGAGGTGGCGCCGGAGGTCGCGGTGGTCGAATTCTCCAAGTCGGCCGGCGACACCCTTGAGTACATAAAGTTCTGTGAGAATGAAGTGAGGCCTGCATTGAAAGACATAGTTTGGAGTTGGCAAGGAGATAGTACCAATACCAATAATAGTAATAGTGATAGTAATTAG 1389 0.4471 MARVNEQSPDQNQNHNDFPRSILFDKYEMGRQLGQGNFAKVYYARNLVTNESVAIKVIKKEKLKKERLVRQIKLEVSVMRLVRHPHIVELKEVMATKGKIFLVMEYVKGGELFSKVAKGKLKEDVARKYFQQLISAIDFCHSRGVTHRDLKPENLLLDENEDLKVSDFGLSALPEQRRSDGMLVTPCGTPAYVAPEVLKKKGYDGSKADIWSCGVILYALLSGYLPFQGENIMKIYKKAFKSEYQFPDWISPEAKNLITNLLIADPEKRYSIPDIMKDPWFQIGFMRPIAFSIKKEPGFDFDEEENEIKGEEAVVRSEEKPSRPFYNAFEIISSLSNGFDLRSLFETRKRSPSMFLSKLSAPVVVSKLESVAKKLNFRITGKKDFKVRMQGETEGRKGKLAMTVEVFEVAPEVAVVEFSKSAGDTLEYIKFCENEVRPALKDIVWSWQGDSTNTNNSNSDSN 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1068 462 SMART serkin_6 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g1068 462 FunFam Non-specific serine/threonine protein kinase 20 322 - -
Mibi11g1068 462 FunFam Non-specific serine/threonine protein kinase 321 445 - -
Mibi11g1068 462 Pfam NAF domain 325 380 IPR004041 GO:0007165
Mibi11g1068 462 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 19 441 - -
Mibi11g1068 462 ProSitePatterns Protein kinases ATP-binding region signature. 33 60 IPR017441 GO:0005524
Mibi11g1068 462 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Mibi11g1068 462 CDD CIPK_C 327 441 - -
Mibi11g1068 462 ProSiteProfiles Protein kinase domain profile. 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g1068 462 SUPERFAMILY Protein kinase-like (PK-like) 23 282 IPR011009 -
Mibi11g1068 462 ProSiteProfiles NAF domain profile. 321 346 IPR018451 GO:0007165
Mibi11g1068 462 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g1068 462 FunFam Non-specific serine/threonine protein kinase 19 106 - -
Mibi11g1068 462 Gene3D Kinase associated domain 1, KA1 326 446 - -
Mibi11g1068 462 Gene3D Transferase(Phosphotransferase) domain 1 20 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1068 Mibi-ChrMibi11 27551983 27553371 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1068 22 462 CBL-interacting serine-threonine protein kinases AT5G25110 63.265 0.0 580
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Mibi11g1068 Pkinase 8.1e-77 CL0016