Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1064 ATGGATTATTCATCATGGATTAACACTTCCTTGGACCTCAACCTTAATCCTAGATCCACAGTCACTGAAGAGATTCCTAAAAAGGAACTGAAAGAAAGCAACTTTTTTGCGTTGGAATTTAAGCCATCTCCTTCCAGACAAGAGAGGGGTAGTGATTTGGAGGAGGAATTGAAGAGGGTGAGTGCAGAAAACAAGAAGCTGACTGAAATGCTGACAGAGATGTGTGAAAATTATAATACTTTGAGGAACTATTTATCTGAGTATATGAGAAAAAACAATGGTAATAATAATGATTCAGAAAAGGAGATGAGCCCACCAAAGAAGAGGAAATCTGATCAAAACAGCAATCCAATTGGGGTTAATGGAAGCAATAATAACTCTGAGAGCAGCTCAACTGATGAAGAAGAATCAAGCAAGAAACCAAGGCATGAGATCATCAAAGCAAAAATCTCTAAAGTTTATGTCAGAACACCAACTTCTGATACCACCCTTATTGTGAAAGATGGATATCAGTGGAGGAAATATGGGCAAAAGGTCACCAGAGACAACCCTTGCCCAAGAGCTTACTTCAAATGCTCTTTTGCTCCCTCATGCCCTGTTAAAAAGAAGGTTCAAAGAAGTGTGGAAGATCAATCAATTCTGGTGGCAACTTATGAAGGAGAGCATAATCATGCACAACCTCCTCAAGTGGAGGCTGCAGCATCAGGTTCAAGCAAAGGATTAGTACCAAGCTCATCTTCTTTAAGACCTTCTCCTCCAAAAGTTACAGTTGACATGAAAAGGTCCAAGTCCTTCAATGAATCCACAAATTCACTTCCAAAGCTTGATTCTTCTGAAGTCCCACAGCTTTTGGTTGAACAGATGGCTACTTCCTTAACCAAGGATCCAAATTTCAGATCAGCTCTTCTAGCAGCCATTTCAGGAAGAATGTTGCACAAGAGTTAG 945 0.4 MDYSSWINTSLDLNLNPRSTVTEEIPKKELKESNFFALEFKPSPSRQERGSDLEEELKRVSAENKKLTEMLTEMCENYNTLRNYLSEYMRKNNGNNNDSEKEMSPPKKRKSDQNSNPIGVNGSNNNSESSSTDEEESSKKPRHEIIKAKISKVYVRTPTSDTTLIVKDGYQWRKYGQKVTRDNPCPRAYFKCSFAPSCPVKKKVQRSVEDQSILVATYEGEHNHAQPPQVEAAASGSSKGLVPSSSSLRPSPPKVTVDMKRSKSFNESTNSLPKLDSSEVPQLLVEQMATSLTKDPNFRSALLAAISGRMLHKS 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1064 314 SUPERFAMILY WRKY DNA-binding domain 161 227 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi11g1064 314 Pfam WRKY DNA -binding domain 167 224 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi11g1064 314 ProSiteProfiles WRKY domain profile. 161 227 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi11g1064 314 MobiDBLite consensus disorder prediction 230 252 - -
Mibi11g1064 314 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 45 310 IPR044810 GO:0003700
Mibi11g1064 314 FunFam WRKY transcription factor 40 151 228 - -
Mibi11g1064 314 Coils Coil 50 77 - -
Mibi11g1064 314 MobiDBLite consensus disorder prediction 94 109 - -
Mibi11g1064 314 SMART WRKY_cls 166 226 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi11g1064 314 MobiDBLite consensus disorder prediction 221 275 - -
Mibi11g1064 314 MobiDBLite consensus disorder prediction 89 144 - -
Mibi11g1064 314 Gene3D WRKY domain 150 228 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi11g1064 314 MobiDBLite consensus disorder prediction 110 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1064 Mibi-ChrMibi11 27468651 27470155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1064 4 313 WRKY Transcription Factor Family AT1G80840 50.625 8.00e-95 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mibi11g1064 WRKY 5.5e-23 CL0274