Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1042 ATGCCTTCCAGGTCCTTCCCTTCTAGTCCCAACCCTCCAAGTTTTTTCATTAAAACCAGAGTCATCTTCCTCGCACTCACAATCTCAGCTTCTGTTGTAATTGTCTGCTCAATCATCTACTTTCTTTACCATTTATGGCATTCTATAGTACACAGAGCTAAAACTATTCCCTTTGATTCGAGTGCTCCTTTGAAGCTTGAAAGATTCTCATACAAAGAATTGAAGCAAGCCACTAATGGCTTTGACTCTGCCAGTATAATTGGTAAAGGAGGGTCTGGAACTGTCTTCAAAGGAACACTTCAAGATGGGAAATTGATTGCAGTTAAGAGGCTAGACGCTTTGTCTTTGCAAACAGAGAGGGAGTTTCAGAATGAGCTTCAGATTCTAGGTGGGTTAAGATCTCCTTTTATTGTGACCCTTTTGGGGTATTGTGTGGAAAAGAACAAGAGAGTGTTGGTGTATGATTATATGCCTAATAGAAGCTTACAAGAGTCCCTATTTGGAGGGGATGATGATGGGAGTTTGTGTATGAGCTGGGAGAGAAGGTTCCACATCATTCTAGATGTTTCTAGGGCCCTGGAGTTCTTGCACCTTGGGTGTGATCCTCCAGTGATCCATGGTGATGTTAAGCCAAGCAATGTTCTTCTTGATTCAGAGTTTAGAGGGAAGGTTTCAGACTTTGGATTGTCAAGGATCAGAGTGGAGAATGAGTTTGGTGTGGATTTGTTTAGCCAGGACTTGGGGAGGAGCCAAGAGCTATGGAAGAGCCAAGAGCTTTCAGGTAATTTAACTACTGAAACTCCAACTCCAGCTATTGGTACACCAGTTGAGAGTGTCAATAATACTACTAATGAAGTAGATTTTGCTTTAGCTTTGCAAGCATCTTCTTCATCCAAAAATAGCAAGACGTGTTTTAATGTTAAAGCTTTGAGCTTGAATTCTTTCAATTATAATGCCAATATTGCCAGTGAGAGTGAAATCAGGAGTTGTAGTAACAATAATGCAAAGGGTAAGGAAATATCAACTCTGGATCATATTGTTGGGGATGATTGGAATCAGAAATTTGTTCCTTATGATGATGAGTTTTCAAGCATTGATCATAGTAAGGAATTGAGTGCTGTAAATGCTGCTTCTGTGGATGGAGAGAAAATAAACGGGAAACAATGGGGAAAGGATTGGTGGTGGAGACAAGATGGAACTGATGAATTATGTAGTAGAGACTATGTGATGGAGTGGATAGGGAGTCAAATTTGTCCATCAAACCCAGATTGGGTAGGAGAGAAGAAGAACATTAATGAAAAAGCAGAGTTAGAAACTTCAAGTCCAGTGAATCATAAAGCAGACGATGAAGCAGATGGGCCCCAATTAGAAGCATTTGGAGTGGGAGATGCAGAGAATGTGGTTGAGAAGAAAGTAGCAAAGTGGGGAATGAAGAAAAACCGAAAGAAAAAGCCAAAGAAGATGCAAGAATGGTGGAAAGAAGAGCACCTATCTGAATTAAGCAAGAAGAGTAGTAAGCTGAAAAATCTTCAAACCAAGTGGAAGAAAGGCTTGAAAGTGCCACATTTTGACCTGGGAAGAAGGTTTTATCTTTGCAAGCGAAGGAGAAGGAACTTCGCCGAAGAAGAAGCTCAGGATGAGAGCGATCATCAAAATGGCGAGTTCAGTTTCAGGAGAGGTTGGAGGAAGAAAAGTACTCGTTCCATTGGCAGTGACATGTGGAGTGGAGATCTTTTCAGCCGCGAGCTGAGCAGCACAACAAGCATGAGAGGAACACTATGTTATGTTGCACCAGAATATGGAGGGTGTGGATACTTAATGGAGAAAGCTGATATTTACAGTTTAGGAGTTTTGATCCTTGTGATTGTGTCAGGAAGAAGGCCATTACATGTTCTTGCATCTCCAATGAAGCTGGAGAAAGCCAACTTAATAAGCTGGTGCAGGCACTTGGCTCATTCTGGTAACATCTTAGAGCTAGTAGATGAGAGACTAAAAGATTATTACAGCAAGGAGCAAGCAAGCTTGTGTATCAACTTGGCACTTGCTTGCTTACAGAAGATTCCGGAATTGAGGCCAGATATCGGCGACGTTGTCAAGATTTTAAAGGGCGAGATGGACCTTCCACCACTGCCATTTGAGTTTTCACCTTCTCCTCCTTCCAAGTTTTACAGCAAATCAAGGACTAAACAGCAGAAGAGCAGCACTACAGAATAA 2214 0.416 MPSRSFPSSPNPPSFFIKTRVIFLALTISASVVIVCSIIYFLYHLWHSIVHRAKTIPFDSSAPLKLERFSYKELKQATNGFDSASIIGKGGSGTVFKGTLQDGKLIAVKRLDALSLQTEREFQNELQILGGLRSPFIVTLLGYCVEKNKRVLVYDYMPNRSLQESLFGGDDDGSLCMSWERRFHIILDVSRALEFLHLGCDPPVIHGDVKPSNVLLDSEFRGKVSDFGLSRIRVENEFGVDLFSQDLGRSQELWKSQELSGNLTTETPTPAIGTPVESVNNTTNEVDFALALQASSSSKNSKTCFNVKALSLNSFNYNANIASESEIRSCSNNNAKGKEISTLDHIVGDDWNQKFVPYDDEFSSIDHSKELSAVNAASVDGEKINGKQWGKDWWWRQDGTDELCSRDYVMEWIGSQICPSNPDWVGEKKNINEKAELETSSPVNHKADDEADGPQLEAFGVGDAENVVEKKVAKWGMKKNRKKKPKKMQEWWKEEHLSELSKKSSKLKNLQTKWKKGLKVPHFDLGRRFYLCKRRRRNFAEEEAQDESDHQNGEFSFRRGWRKKSTRSIGSDMWSGDLFSRELSSTTSMRGTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPLHVLASPMKLEKANLISWCRHLAHSGNILELVDERLKDYYSKEQASLCINLALACLQKIPELRPDIGDVVKILKGEMDLPPLPFEFSPSPPSKFYSKSRTKQQKSSTTE 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1042 737 FunFam putative receptor-like protein kinase At1g80870 157 271 - -
Mibi11g1042 737 Gene3D Phosphorylase Kinase; domain 1 47 156 - -
Mibi11g1042 737 FunFam Receptor-like serine/threonine-protein kinase At4g25390 50 156 - -
Mibi11g1042 737 Gene3D Transferase(Phosphotransferase) domain 1 560 707 - -
Mibi11g1042 737 Gene3D Transferase(Phosphotransferase) domain 1 157 275 - -
Mibi11g1042 737 ProSitePatterns Protein kinases ATP-binding region signature. 87 109 IPR017441 GO:0005524
Mibi11g1042 737 SUPERFAMILY Protein kinase-like (PK-like) 60 722 IPR011009 -
Mibi11g1042 737 MobiDBLite consensus disorder prediction 719 737 - -
Mibi11g1042 737 Pfam Protein kinase domain 584 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g1042 737 Pfam Protein kinase domain 84 234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g1042 737 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Mibi11g1042 737 SMART serkin_6 81 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g1042 737 ProSiteProfiles Protein kinase domain profile. 81 710 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g1042 737 Coils Coil 493 513 - -
Mibi11g1042 737 PANTHER OS07G0586332 PROTEIN 15 730 IPR044576 -
Mibi11g1042 737 FunFam Receptor-like serine/threonine-protein kinase At4g25390 558 707 - -
Mibi11g1042 737 MobiDBLite consensus disorder prediction 711 737 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1042 Mibi-ChrMibi11 26968688 26970901 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1042 569 701 Receptor kinase-like Gene Family AT3G58690 32.836 1.37e-13 71.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Mibi11g1042 Pkinase 8.5e-27 CL0016