Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1038 ATGGGAGTATACCTCAGTAGTCCAAAAACAGAAAAGGTATCTGAAGATGGCGAGAATGAAAGGCTTCGCTATGGTTTAGCTTCCATGCAAGGATGGCGTAGAACCATGGAAGATGCTCATGCTGCCCATCCTGATTTAGACGAGTCTACGTCTTTCTTTGGTGTTTATGATGGCCATGGAGGTAAAGTGGTTGCTAAATTCTGTGCCAAGTATCTACACCAACAGATGCTCAAGCATGAAGCTTATTTAGCTGGAGATTTAAGCACATCTTTACAATACTCTTTTCTCAGGATGGACGAGATGATGCGTGGACAAAGAGGGTGGAGAGAATTAGCAGTCTTGGGAGAGAAACCAAAGAAGTTTTCTAGTTTGAGAAGTTTGTTTATAAGGACTCCAAAGAATTGTGCAGGCAATGGCCGTGTTGATGACTGGGCTTATGAGGAGGGGCCACATTGTGGTTTCAGGGGACCAAAGGCAGGATGCACAGCTTGTGTTGCAGTCATCCGAGGCAACCATCTTCTTGTAGCAAATGCGGGTGATTCCCGCTGTGTATTATCAAGGAAGGGCCAGGCACATAATTTAACTAAAGATCACAAGCCTGAACTCGAGGTTGAAAAATACCGGATCCAAAATGCTGGTGGTTTTGTTCAATTTGGACGTGTCAATGGAAGCTTAAATTTGACTAGAGCAATTGGAGATTTTGAATTCAAGGAAAACGAGCATTTGCCTGCGGAAAAGCAGATGGTAACTGCCGATCCAGAGTTAACTTCTGTTGAACTTTGCTGTGATGATGAATTTCTTGTAATAGCTTGTGATGGAATATGGGATTGCATGTCAAGCCAACATATTGTGGACTTCATACATGAACAGTTACAGACAGAAAAGAACCTAAAAGTGGTATGTGAAAGAGTATTGGATTGGTGCTTGGCACCAGCAGCTGGTGGTCTGGGATGTGACAACATGACCATGATCTTGATTCAGTTCAAAAGGCCTTCAAATTCATGTGGTTCTGTCATTAGCCAGCAAGCCTCTGTTGTCCACAGATAG 1047 0.4336 MGVYLSSPKTEKVSEDGENERLRYGLASMQGWRRTMEDAHAAHPDLDESTSFFGVYDGHGGKVVAKFCAKYLHQQMLKHEAYLAGDLSTSLQYSFLRMDEMMRGQRGWRELAVLGEKPKKFSSLRSLFIRTPKNCAGNGRVDDWAYEEGPHCGFRGPKAGCTACVAVIRGNHLLVANAGDSRCVLSRKGQAHNLTKDHKPELEVEKYRIQNAGGFVQFGRVNGSLNLTRAIGDFEFKENEHLPAEKQMVTADPELTSVELCCDDEFLVIACDGIWDCMSSQHIVDFIHEQLQTEKNLKVVCERVLDWCLAPAAGGLGCDNMTMILIQFKRPSNSCGSVISQQASVVHR 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1038 348 PANTHER PROTEIN PHOSPHATASE 2C 18 327 IPR015655 GO:0004722|GO:0006470
Mibi11g1038 348 SUPERFAMILY PP2C-like 3 330 IPR036457 -
Mibi11g1038 348 CDD PP2Cc 23 328 IPR001932 -
Mibi11g1038 348 ProSiteProfiles PPM-type phosphatase domain profile. 23 328 IPR001932 -
Mibi11g1038 348 Pfam Protein phosphatase 2C 158 313 IPR001932 -
Mibi11g1038 348 Pfam Protein phosphatase 2C 23 104 IPR001932 -
Mibi11g1038 348 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Mibi11g1038 348 Gene3D - 1 329 IPR036457 -
Mibi11g1038 348 SMART PP2C_4 13 326 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1038 Mibi-ChrMibi11 26890715 26902629 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1038 1 334 PP2C-type Phosphatase Gene Family AT2G25070 68.955 2.14e-180 502