Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1031 ATGGTTTTTATAGGGGCATTGTTCATCCTCCTAGTCCTACTTCAATACCCAACTTCAACATCTAGTATCACCCATCCACGCCATCACCACTTTTCTCACACTCTTCTTACAGATAAGGCTGCTCTTCTGGAATTCAAGAGAACAATCATATTTGATCCACATTCCACACTTTCTAACTGGGATGAGGCTGTTCATGTGTGCAATTTCACGGGCATTAAGTGCGATAAATTTCAGCACCGAGTTACCGAACTAACCCTGACCGAAACTCATCTTGTGGGGTTGCTTTCACCCTCCCTTTCCAATCTCACTGGACTTCACATCCTTGACATTGTTAACAACCAATTATTTGGCATTATCCCACCAGAATTTTCCTCCCTTACACGTCTCCACCGACTCCATCTCGAGGGGAACCATCTGCATGGTCCCATACCAGACTCCTTGTCCCAGCTTTCTAAACTCAACGTGTTGCATGTCAAAGAGAGCAACATAACTGGTTCACTTTCTCCATCTCTTTTCTCCAACTGCACACTGGAAATTCTGGACCTTTCTAGCAACTTCCTCAGCGGTAAGGTCCCAGAGGAGATTGGAAACTGTCCAGGTCTATGGAGTCTCAATCTATACAACAATCAATTTACTGGACAGATTCCTCTATCTCTTACTAATCTGTCACTTGTAAACTTAGATGTAGAGTACAATCTATTGTCTGGAGAATTGCCTTCAGAGATTGTAAGCAGATGTCCTGATCTTCTTTACCTACATTTGTCATACAACCACATGATAAGTCGAGATTATAATACCAATCTTGATCCATTTTTTGTTGCTCTTAGAAACTGCAGCAGTCTAGAGGAGATTGAATTGGCTGGCATGGGCCTTGGGGGAATGTTCTCCGATACTGTCTGTCAAGTTGGCATCAAAGTGAAAAGTTTGCTGATGCAGGAAAATCAAATATATGGATCGATCCCTGACAGTGTCTCAAATCTTTCCAGCCTTATGATCCTGAACTTAACATCCAATCTTCTGAATGGAACTATTTCACCAGAGATCAGCATGTTGTCAAACTTGGAACAACTATTCTTATCAAACAACCACTTCAAATCTGCAATTCCAGAAGCACTGGGCAACTGTCTAAATCTGGGTCTGTTAGATCTGTCAGGCAATGAATTTACAGGAGGGATTCCAGAAAGTCTTGGAAAGTTGAGTCGGCTAAATTCTTTGTTTCTCAATAATAACCACCTCACAGGAAATGTACCTTCAACATTAGGACAGTGCATTGGTCTGTATAGGCTTGACTTGTCCTATAACAGATTAACCGGAAGCATCCCACCAGAACTCTCAGGCCTGCATGAAATTAGAATTTTCATAAACCTCTCACATAACCAACTAGAAGGTCCCCTGCCAATAGAGCTCAGCAAACTAGAAAAGGTTCAAGAGATGGATTTTTCATCAAATTTCCTAACCGGAAGTATTTTCCCTCAGATAGCAAGCTGCATTGCTGTATCATTGATAAATTTTTCAAACAATTTGCTACAAGGCGAGCTTCCTGAATCCTTAGGTGAACTGAAGAACCTTGAAACTTTTGATGTTTCACGAAACAATCTGTCAGGATTGATCCCGAAAACTCTTACTAAAATAGATACACTTTCTTTCCTCAATCTATCATATAATAACCTAGAAGGAATGGTTCCATCTGGCGGTATCTTTGATTCAGAATCAAATTCATCATTCTTAGGAAACCCACATCTTTGTGGAACAATTACGGGCAACCTTTCATGCTTTCAAAAGAGACATTGGTTCAGAAATCGCCTGTTCTTGATAATTTTCAACTTGGTAATCTGCATGGTCTTGTCAATGGTCTGCTGCATAATTGGATATAAGCGTCTGAAAATGATCATTTCTGCCCAGGGAGCTGAATTATGTGGAAAACCAGCTAGAGGTAAACTGATGAGTAACTTCCCAAGAATCACATACAAGGAACTATCAGAGGCCACTGGAGGATTTGATGATCAGAGACAAGTAGGATCAGGTAGCTATGGACATGTCTATAGAGGAGTTTTTCCAGATGGAACCCCAATAGCAGTCAAGGTGCTGCATTTGAAGTCTAGAAACTCCACCAAGAGCTTCCATAGAGAATGCCAAATTTTAAAGAGGATTCGACACAGGAACCTGATAAGAATTATCACTGCATGTAGTCTACCTGATTTCAAAGCTCTTGTTCTGCCTTATATGGCCAATGGGAGTTTGGAGAGCCGACTCTATGCTTCTCCTGGATCTTCTGACCTGAGTATCATCCAGAGGGTGAATATCTGCAGTGACATAGCTGAAGGGTTGGCCTACCTGCATCATCATTCTCCAGTCAAAGTCATTCATTGTGATTTAAAACCAAGCAATGTTCTTCTTAACGATGACATGACAGCTGTAGTTTCAGATTTCGGGATTGCAAGATTAATTATGAGTGTTGAAGGAGGAAATACTTGGTTTAATGATAACATGGGGAGTTCCACTGCAAATATGTTATGTGGATCTATCGGATACATAGCACCAGAGTACGGATTTGGATCAAATACAACCACAAAAGGAGATGTGTTCAGCTTTGGTATTATTGTTCTTGAGATGGTGACTAGAAAAAAACCAACAGATGACATGTTTTCTGGTGGCTTAAGCCTTCACAAATGGGTAAAAATTCATTATCATGAACGGTCAGAAAAAGTGATAGACTCATCTCTGGTTACTGCTTCAAGAGATCAGTCACAGGAGGTGAAAAAAATGTGGGAAGTTGCAATTGGAGAGTTAATTGAGCTGGGGATCCTTTGCACACAGGAATCACCTTCTACAAGGCCTAGTATGCTTGATGTAGCAGATGACTTGGATCGTCTCAAGGGATACCTTACTGGGGACACAACCAGAACTTTTGCCTCATCTCTTGGAATTTCATCTTCTACTACAGATTATTTTTACAAGTTTTTTTATGATGTAGTCTTGAAGTAA 2985 0.4074 MVFIGALFILLVLLQYPTSTSSITHPRHHHFSHTLLTDKAALLEFKRTIIFDPHSTLSNWDEAVHVCNFTGIKCDKFQHRVTELTLTETHLVGLLSPSLSNLTGLHILDIVNNQLFGIIPPEFSSLTRLHRLHLEGNHLHGPIPDSLSQLSKLNVLHVKESNITGSLSPSLFSNCTLEILDLSSNFLSGKVPEEIGNCPGLWSLNLYNNQFTGQIPLSLTNLSLVNLDVEYNLLSGELPSEIVSRCPDLLYLHLSYNHMISRDYNTNLDPFFVALRNCSSLEEIELAGMGLGGMFSDTVCQVGIKVKSLLMQENQIYGSIPDSVSNLSSLMILNLTSNLLNGTISPEISMLSNLEQLFLSNNHFKSAIPEALGNCLNLGLLDLSGNEFTGGIPESLGKLSRLNSLFLNNNHLTGNVPSTLGQCIGLYRLDLSYNRLTGSIPPELSGLHEIRIFINLSHNQLEGPLPIELSKLEKVQEMDFSSNFLTGSIFPQIASCIAVSLINFSNNLLQGELPESLGELKNLETFDVSRNNLSGLIPKTLTKIDTLSFLNLSYNNLEGMVPSGGIFDSESNSSFLGNPHLCGTITGNLSCFQKRHWFRNRLFLIIFNLVICMVLSMVCCIIGYKRLKMIISAQGAELCGKPARGKLMSNFPRITYKELSEATGGFDDQRQVGSGSYGHVYRGVFPDGTPIAVKVLHLKSRNSTKSFHRECQILKRIRHRNLIRIITACSLPDFKALVLPYMANGSLESRLYASPGSSDLSIIQRVNICSDIAEGLAYLHHHSPVKVIHCDLKPSNVLLNDDMTAVVSDFGIARLIMSVEGGNTWFNDNMGSSTANMLCGSIGYIAPEYGFGSNTTTKGDVFSFGIIVLEMVTRKKPTDDMFSGGLSLHKWVKIHYHERSEKVIDSSLVTASRDQSQEVKKMWEVAIGELIELGILCTQESPSTRPSMLDVADDLDRLKGYLTGDTTRTFASSLGISSSTTDYFYKFFYDVVLK 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1031 994 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 348 956 - -
Mibi11g1031 994 SMART LRR_typ_2 399 423 IPR003591 -
Mibi11g1031 994 SMART LRR_typ_2 126 150 IPR003591 -
Mibi11g1031 994 SMART LRR_typ_2 351 375 IPR003591 -
Mibi11g1031 994 SMART LRR_typ_2 102 125 IPR003591 -
Mibi11g1031 994 SMART LRR_typ_2 520 543 IPR003591 -
Mibi11g1031 994 ProSiteProfiles Protein kinase domain profile. 666 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g1031 994 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 646 741 - -
Mibi11g1031 994 ProSitePatterns Serine/Threonine protein kinases active-site signature. 787 799 IPR008271 GO:0004672|GO:0006468
Mibi11g1031 994 Gene3D Ribonuclease Inhibitor 37 151 IPR032675 -
Mibi11g1031 994 Gene3D Ribonuclease Inhibitor 152 223 IPR032675 -
Mibi11g1031 994 Gene3D Transferase(Phosphotransferase) domain 1 742 969 - -
Mibi11g1031 994 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 173 262 - -
Mibi11g1031 994 CDD STKc_IRAK 672 958 - -
Mibi11g1031 994 Pfam Leucine Rich Repeat 177 198 IPR001611 GO:0005515
Mibi11g1031 994 Pfam Leucine Rich Repeat 105 126 IPR001611 GO:0005515
Mibi11g1031 994 Pfam Protein kinase domain 667 951 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g1031 994 Pfam Leucine rich repeat 352 412 IPR001611 GO:0005515
Mibi11g1031 994 SUPERFAMILY L domain-like 306 583 - -
Mibi11g1031 994 SUPERFAMILY L domain-like 34 293 - -
Mibi11g1031 994 FunFam Nuclear pore complex protein NUP107 36 172 - -
Mibi11g1031 994 ProSitePatterns Protein kinases ATP-binding region signature. 672 694 IPR017441 GO:0005524
Mibi11g1031 994 Gene3D Ribonuclease Inhibitor 224 597 IPR032675 -
Mibi11g1031 994 SUPERFAMILY Protein kinase-like (PK-like) 648 955 IPR011009 -
Mibi11g1031 994 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 299 595 - -
Mibi11g1031 994 Gene3D Phosphorylase Kinase; domain 1 646 741 - -
Mibi11g1031 994 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 742 968 - -
Mibi11g1031 994 SMART serkin_6 666 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g1031 994 Pfam Leucine rich repeat N-terminal domain 37 75 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1031 Mibi-ChrMibi11 26751204 26754471 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1031 29 955 Receptor kinase-like Gene Family AT3G47570 34.036 1.71e-158 492
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mibi11g1031 Pkinase 2.4e-43 CL0016