Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1025 ATGGCTAAAATGTCACAGAGGAAGGTGAAGAACGCTGAAAATAGCAGCAATACGCCTTCAAAAACGAAGACGAAACGCACTCGCAAAAGCATTCCCAGAGATTCACCTCCACAACGAAGCTCCGTTTATAGAGGCGTAACTAGACATCGTTGGACGGGTCGCTATGAAGCTCATCTTTGGGATAAGAATTGTTGGAACGAATCGCAGAGCAAGAAAGGAAGACAAGGGGCTTATGATGATGAAGAAACTGCAGCACGTGCCTATGACTTGGCAGCATTGAAGTACTGGGGCCAAGACACCATCCTCAATTTTCCTCTCACAAATTATGAACAAGAGCTCAAGGAGATGGAGGGTCAGTCAAAAGAAGAATACATTGGATCCTTAAGAAGAAAAAGCAGTGGATTCTCAAGAGGAGTCTCAAAATACAGAGGCGTAGCCAGACACCATCACAATGGAAGATGGGAGGCTCGGATTGGTAGAGTTTTCGGCAACAAATATCTTTATCTCGGAACTTACGCTACACAAGAAGAAGCAGCCACAGCGTATGACATGGCAGCCATAGAATACAGAGGACTTAACGCCGTTACAAACTTTGACCTCAGCCGTTATGTCAATTGGCTCCGTCCAAATAATAAAACCCAAAATCACTCTGATGAAAACCCTACCATTGATGATAACAGCACTGAGTCAGGATCAAGTTCTAACAATAAGCCTGAACTTGATTTGGGTTTTGGGCCCCACCAACTCGGTTCAAACTCCGACGACCCAATGACGGCGGCTCCGCGGTCATCTACAGCTCTAGGGCTTCTCTTGCAATCATCAAAGTTTAAGGAAATGCTGGAGAGGTCGTCTTCTTCATCATCAGGTGGTGGAGACCATAATAATAATAATGATAATGATAATAATTACCCTGCAACGATAGAAACTTCAGAATCAAAGCCTCCTCGTCGTACATTTCCTGAAGATATTCAAACATTTTTTGATTGTCATGAATCAAGCAGCAGCTACACTGAAACTGATGACATCATATTTGGTAATTTGGGCTCATTTGCTGCTCCAATTTTCCATTGCGAGCTGGATGCTTAG 1086 0.4374 MAKMSQRKVKNAENSSNTPSKTKTKRTRKSIPRDSPPQRSSVYRGVTRHRWTGRYEAHLWDKNCWNESQSKKGRQGAYDDEETAARAYDLAALKYWGQDTILNFPLTNYEQELKEMEGQSKEEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYATQEEAATAYDMAAIEYRGLNAVTNFDLSRYVNWLRPNNKTQNHSDENPTIDDNSTESGSSSNNKPELDLGFGPHQLGSNSDDPMTAAPRSSTALGLLLQSSKFKEMLERSSSSSSGGGDHNNNNDNDNNYPATIETSESKPPRRTFPEDIQTFFDCHESSSSYTETDDIIFGNLGSFAAPIFHCELDA 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1025 361 MobiDBLite consensus disorder prediction 1 45 - -
Mibi11g1025 361 MobiDBLite consensus disorder prediction 209 262 - -
Mibi11g1025 361 MobiDBLite consensus disorder prediction 278 319 - -
Mibi11g1025 361 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 14 278 - -
Mibi11g1025 361 FunFam AP2-like ethylene-responsive transcription factor 41 107 - -
Mibi11g1025 361 Pfam AP2 domain 41 97 IPR001471 GO:0003700|GO:0006355
Mibi11g1025 361 Pfam AP2 domain 140 191 IPR001471 GO:0003700|GO:0006355
Mibi11g1025 361 Gene3D AP2/ERF domain 140 201 IPR036955 GO:0003700|GO:0006355
Mibi11g1025 361 Gene3D AP2/ERF domain 42 107 IPR036955 GO:0003700|GO:0006355
Mibi11g1025 361 ProSiteProfiles AP2/ERF domain profile. 42 105 IPR001471 GO:0003700|GO:0006355
Mibi11g1025 361 SUPERFAMILY DNA-binding domain 140 201 IPR016177 GO:0003677
Mibi11g1025 361 CDD AP2 41 105 IPR001471 GO:0003700|GO:0006355
Mibi11g1025 361 FunFam AP2-like ethylene-responsive transcription factor 140 201 - -
Mibi11g1025 361 MobiDBLite consensus disorder prediction 278 313 - -
Mibi11g1025 361 PRINTS Ethylene responsive element binding protein signature 181 201 IPR001471 GO:0003700|GO:0006355
Mibi11g1025 361 PRINTS Ethylene responsive element binding protein signature 43 54 IPR001471 GO:0003700|GO:0006355
Mibi11g1025 361 ProSiteProfiles AP2/ERF domain profile. 141 199 IPR001471 GO:0003700|GO:0006355
Mibi11g1025 361 CDD AP2 140 201 IPR001471 GO:0003700|GO:0006355
Mibi11g1025 361 MobiDBLite consensus disorder prediction 224 239 - -
Mibi11g1025 361 SMART rav1_2 141 205 IPR001471 GO:0003700|GO:0006355
Mibi11g1025 361 SMART rav1_2 42 111 IPR001471 GO:0003700|GO:0006355
Mibi11g1025 361 SUPERFAMILY DNA-binding domain 41 106 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1025 Mibi-ChrMibi11 26672697 26677084 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1025 38 203 AP2-EREBP Transcription Factor Family AT5G57390 72.189 3.56e-87 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Mibi11g1025 AP2 1.2e-09 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi11g1025 11 26672697 26677084 Mibi11g1025 11 26672697 26677084 ECH