Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1023 ATGGAGAAATATGAGAAGTTGGAGAAGGTAGGAGAGGGGACTTATGGGAAGGTATACAAAGCAAAAGAGAAGGCCACAGGGCAGCTAGTGGCACTGAAGAAGACACGTCTTGAAATGGATGAAGAAGGAATTCCTCCTACTGCTCTTAGAGAAATCTCCCTCCTTCAAATGCTCTCACAATCCCTCTACATTGTTCGCCTCCTCGGCGTCGAACATGTCGATAAGGGTCCGAGGAATGTTGCTACTGGTTCCCTTTACCTTGTTTTTGAGTACTTAGATACTGACCTTAAGAAGCACATTGTTTCTCACCAAAGGCCTCTTGCTCATTCCGTAATTCAGAGCTTTCTTTTCCAGCTTTGTAAGGGAGTTGCTCATTGTCATAGCCATGGTGTCCTCCACCGTGATCTTAAGCCCCAGAATCTTCTTCTTGATCAGAAGAAGGGGATTCTCAAGATTGCTGATCTTGGTCTTGGAAGAGCTTTCACTGTCCCTCTTAAGAGTTACACTCATGAGATTGTCACTCTTTCGTATAGAGCGCCTGAGGTTCTGCTTGGATCCACTCACTACTCCACTGGGGTTGATATGTGGTCTGTTGGATGCATTTTTGGAGTTACTTCTTTGAAGAACTGGCATGTCTACCCCCGGTGGAAAAAAATGCTCAAATACAAGCCTGCTGAGAGAATCTCTGCAAAGGCAGCACTTGATCATCCCTACTTTGATGGCCTGGACAAGTCCCAATTTTAA 744 0.453 MEKYEKLEKVGEGTYGKVYKAKEKATGQLVALKKTRLEMDEEGIPPTALREISLLQMLSQSLYIVRLLGVEHVDKGPRNVATGSLYLVFEYLDTDLKKHIVSHQRPLAHSVIQSFLFQLCKGVAHCHSHGVLHRDLKPQNLLLDQKKGILKIADLGLGRAFTVPLKSYTHEIVTLSYRAPEVLLGSTHYSTGVDMWSVGCIFGVTSLKNWHVYPRWKKMLKYKPAERISAKAALDHPYFDGLDKSQF 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1023 247 SMART serkin_6 4 239 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g1023 247 Gene3D Phosphorylase Kinase; domain 1 1 93 - -
Mibi11g1023 247 SUPERFAMILY Protein kinase-like (PK-like) 1 242 IPR011009 -
Mibi11g1023 247 PANTHER CELL DIVISION PROTEIN KINASE 1 203 - -
Mibi11g1023 247 ProSiteProfiles Protein kinase domain profile. 4 247 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g1023 247 FunFam Cyclin-dependent kinase B2,2 1 93 - -
Mibi11g1023 247 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Mibi11g1023 247 ProSitePatterns Serine/Threonine protein kinases active-site signature. 131 143 IPR008271 GO:0004672|GO:0006468
Mibi11g1023 247 Gene3D Transferase(Phosphotransferase) domain 1 94 246 - -
Mibi11g1023 247 Pfam Protein kinase domain 4 202 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1023 Mibi-ChrMibi11 26648955 26650407 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1023 1 247 Core Cell Cycle Gene Families AT3G54180 66.019 1.57e-133 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Mibi11g1023 Pkinase 8.8e-54 CL0016