Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1016 ATGGTTCTCGTGTTTTGGATCCATCTTGAACATCTTCCCTCTTCAAATCCAATACTTTTTTCTCCGATGGGTTCTGTAGAGAAGAAAGACCTTGATTTTGATGAGGAGGTCCCTTTTAGCTCCTCAACAAATCCGGGGAAAGTCCATGCTCTTCAATTTGAGACAACTCATGTGCTTTCTTCTGTAAATTTGGCCGGCTCATCCATCTTCAAGCAAATAGGGATAAGACCTATCAGGAGCATATATGTTGTTTTAATTAAAGCGAAGATCAACATGTTGCTACCTTTTGGTCCCTTGGCCATATTGCTAAATTATATAACAGGAAACCATGGTTGGGTATTCTTCTTCACCCTACTGGGTATTACTCCTTTGGCAGAACGTCTCGGTTATGCTACTGAGCAGCTTGCATTTTTTACAGGACCAACAGTTGGGGGTTTGCTAAACGCCACATTTGGCAATGCAACTGAAATGATCATATCAATATATGCGTTGAAAAATGGGATGATTAGGGTTGTTCAGCAATCTTTACTGGGCTCAATCTTATCAAATATGCTTCTTGTTCTGGGATGTGCATTCCTTACCGGTGGGATTGTCCACTACGAAAAGGTTCAGGTTTTTAACAAGGCATCTGCTGTTGTGAATTCTGGGTTGCTATTGATGGCTGTGATGGGAATACTGTTTCCTGCTGTGCTCCACTTTACTCACTCAGAGGTTCACTTTGGCAAGTCAGAGGTTTCTCTGTCCAGATTTAGTAGCTGTATAATGCTAATAGCATATGCTAGCTACCTTTTCTTCCAATTAAAAAGTCATCACAATGATTATAGTTCACTTGAACAGGAAAGAGATAATGATGAAAGTCCTGATGAGGAAGAAGAATGTGAATTAACAAAATGGGAGGCGATAGGCTGGCTTGCTGTTTTGACAGCATGGGTTTCTATTTTATCTGGATACCTTGTGGATGCCATACAGGGGGCATCTGAGTCTTGGAATATGCCAGTGGCGTTTATTAGTGTCATATTGCTTCCAATTGTAGGAAATGCTGCAGAGCATGCGAGTGCTATCATGTTTGCCATGAAGGACAAGCTTGATATTACACTTGGAGTTGCTATTGGGTCATCTACTCAGATATCTATGTTTGTGATTCCCTTTTGTGTGGTAGTTGGGTGGTGCTTGGGAAAACCAATGGACTTGAATTTTCAACTCTTTGAGACTGCTACACTTTTTATCACCGTGCTCGTTGTCGCATTTATGTTGCAGGATGGGACCTCTAATTATTTTAAAGGCTTGATGCTTATTCTTTGCTATCTCATTGTTGCGGCCAGTTTCTTCGTTCACGTGGACCCCAAAACCCCCAAAAACAGTGATGGCGAATGA 1374 0.4141 MVLVFWIHLEHLPSSNPILFSPMGSVEKKDLDFDEEVPFSSSTNPGKVHALQFETTHVLSSVNLAGSSIFKQIGIRPIRSIYVVLIKAKINMLLPFGPLAILLNYITGNHGWVFFFTLLGITPLAERLGYATEQLAFFTGPTVGGLLNATFGNATEMIISIYALKNGMIRVVQQSLLGSILSNMLLVLGCAFLTGGIVHYEKVQVFNKASAVVNSGLLLMAVMGILFPAVLHFTHSEVHFGKSEVSLSRFSSCIMLIAYASYLFFQLKSHHNDYSSLEQERDNDESPDEEEECELTKWEAIGWLAVLTAWVSILSGYLVDAIQGASESWNMPVAFISVILLPIVGNAAEHASAIMFAMKDKLDITLGVAIGSSTQISMFVIPFCVVVGWCLGKPMDLNFQLFETATLFITVLVVAFMLQDGTSNYFKGLMLILCYLIVAASFFVHVDPKTPKNSDGE 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1016 457 FunFam Vacuolar cation/proton exchanger 288 444 - -
Mibi11g1016 457 FunFam Vacuolar cation/proton exchanger 141 280 - -
Mibi11g1016 457 Pfam Sodium/calcium exchanger protein 112 267 IPR004837 GO:0016020|GO:0055085
Mibi11g1016 457 Pfam Sodium/calcium exchanger protein 301 440 IPR004837 GO:0016020|GO:0055085
Mibi11g1016 457 TIGRFAM caca2: calcium/proton exchanger 83 443 - -
Mibi11g1016 457 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 77 448 IPR004713 GO:0006812|GO:0008324|GO:0016020
Mibi11g1016 457 TIGRFAM cax: calcium/proton exchanger 93 443 IPR004798 GO:0006816|GO:0015369
Mibi11g1016 457 Gene3D - 141 277 IPR044880 -
Mibi11g1016 457 Gene3D - 290 444 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1016 Mibi-ChrMibi11 26521879 26530984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1016 78 448 Antiporters AT3G13320 76.613 0.0 586