Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1015 ATGAAACCCACCCACCCTCCTCCGCCGCCGTTCACCGCAACAACAACCAACCATGACCCCCCGCCGCCGCCGCGCCGCCGCAAGAATCTCAGCTTACCGTTACCCCAACGGAACGCATCCATAGCGATGCCTCTCCCTCTTCCTCCATCAAACAACTCACTCCCATCAACAACAACCCACCATCAGATCCCATTCACCGACCTCGAACGCCTCAATCGAATCGGCAGCGGAAGCGGCGGTACCGTCTACAAAGTCCGTCACCGTCAAACCGGCCGCTTCTACGCCCTCAAGGTCATCTACGGAACTCACGAGGATTCCGTACGCCGTCAGATCCACCGTGAAATCCAGATCCTCCGTGACGTCAACGACCAAAACGTTGTTAACTGCCACGACATGTACGACCACAACGGTGAAATCCAAGTACTCCTTGAGTACATGGATGGCGGATCTTTAGAAGGGCTAACTATTGTGAACGAAAGGAATCTTGCCGATGTTGCGAGGCAGATTCTCCGAGGTTTGGCTTATCTTCATAGGCTTCATATTGTTCATAGGGATATTAAACCCTCGAATTTGTTGATTAATTCGAATAAGCAGGTTAAGATTGCTGATTTTGGGGTGGGTAGGATTTTAGCGCAGACTATGGATCCGTGTAATTCGTCGGTGGGTACTATTGCTTATATGAGCCCTGAGAGGATTAATACTGATATCAATGATGGGCAGTATAATGCTTATGCTGGTGATATATGGAGCCTTGGGGTTAGTATATTGGAGTTTTATATGGGTAAGTTCCCACTTGCTGTGGGTAGGCAAGGTGATTGGGCAAGCTTGATGTGTGCAATTTGTATGTCTCAGCCGCCGGAGGCGCCGCACACGGCGTCGCCGGAGTTTCGGGATTTTATTTCGCGGTGTTTGCAGAGGGATCCGTCGCGGCGGTGGACGGCGGCGAGGTTGTTGGAGCACCCATTTATAGCTAAGGGAAGTGGAAACCAGAATCAGGTTCATCAGAATCTTCATCAATTGCTACCTCCTCCTGGACTGCCTTCTTCATCATAG 1053 0.509 MKPTHPPPPPFTATTTNHDPPPPPRRRKNLSLPLPQRNASIAMPLPLPPSNNSLPSTTTHHQIPFTDLERLNRIGSGSGGTVYKVRHRQTGRFYALKVIYGTHEDSVRRQIHREIQILRDVNDQNVVNCHDMYDHNGEIQVLLEYMDGGSLEGLTIVNERNLADVARQILRGLAYLHRLHIVHRDIKPSNLLINSNKQVKIADFGVGRILAQTMDPCNSSVGTIAYMSPERINTDINDGQYNAYAGDIWSLGVSILEFYMGKFPLAVGRQGDWASLMCAICMSQPPEAPHTASPEFRDFISRCLQRDPSRRWTAARLLEHPFIAKGSGNQNQVHQNLHQLLPPPGLPSSS 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1015 350 MobiDBLite consensus disorder prediction 1 20 - -
Mibi11g1015 350 SUPERFAMILY Protein kinase-like (PK-like) 66 343 IPR011009 -
Mibi11g1015 350 FunFam Mitogen-activated protein kinase 2 148 335 - -
Mibi11g1015 350 Pfam Protein kinase domain 69 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g1015 350 Gene3D Phosphorylase Kinase; domain 1 50 147 - -
Mibi11g1015 350 MobiDBLite consensus disorder prediction 1 31 - -
Mibi11g1015 350 ProSiteProfiles Protein kinase domain profile. 68 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g1015 350 Gene3D Transferase(Phosphotransferase) domain 1 148 340 - -
Mibi11g1015 350 ProSitePatterns Serine/Threonine protein kinases active-site signature. 181 193 IPR008271 GO:0004672|GO:0006468
Mibi11g1015 350 CDD PKc_MAPKK_plant_like 67 328 - -
Mibi11g1015 350 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 40 326 - -
Mibi11g1015 350 SMART serkin_6 68 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g1015 350 ProSitePatterns Protein kinases ATP-binding region signature. 74 97 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1015 Mibi-ChrMibi11 26476755 26477807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1015 1 339 MAP Kinase Kinase Gene Family AT1G51660 64.888 7.74e-163 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Mibi11g1015 Pkinase 5.1e-66 CL0016