Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0965 ATGGATCCAGTAGCTGCACAAGGCCGTCCTCTCCCACCACCTTTCCTCACTAGAGATCTTCACCTTCACCATCCCCATCCCCATCACCAATTCCAAACCCACCACCATACCAACAACAACAACAACAACCACCACCACTCCGCCGACAACAACGACGACCACAACAACAACAACAACCTAAGCCGAGGCCAGAAGCGAGATCATGACGACATAACCGCCGACAACAACAACAATAACAAAGAATTCGGTGCTAACCACAATACCGACACCACCGGTAGCGGTGATGGCGGCGGGGAAAATAGCGGGAGGAGGCCACGTGGCAGGCCGGCAGGCTCAAAGAACAAGCCGAAGCCACCGATCATCATAACAAGGGACAGCGCCAACGCGCTTAGGTCCCACGTCATGGAGATCGGCAACGGAGGCGATATCATGGAGAGCGTCGCCACCTTTGCACGGCGGAGGCAGCGCGGCGTTTGCATCCTAAGCGGCGGCGGAACCGTCACGAACGTCACGCTCCGGCAGCCGGCGTCGCCGGGTGCCGTCGTAACCCTACATGGGCGGTTCGAGATTTTGTCGCTCTCCGGCTCGTTCCTCCCGCCGCCGGCGCCGCCAGCCGCCTCCGGGCTCGCTATTTACCTCTCCGGCGGGCAGGGGCAGGTCGTCGGGGGCACGGTGGTGGGCCCGCTGATTGCGTCGGGCCCGGTGGTGATAATGGCGGCGTCGTTCGGGAACGCGGCGTATGAGAGGTTGCCGTTGGAGGAGGAGGAGGCGGTGGCCGCCGGCGGTGGCAGCGGCGGAGGGTTGGGATCGCCGCCGCCGGGGATCGTGGGACAACAACAACAACAACCACAACATCACCAACAGCAGCAGCAGCAAATTGTGGGAGATGCTGCTAATAACTTTCTTGGAGTTAATAATCAGAATCTTATGAGCTCTTGTCAATTACCAGCTGAAGGATTTTGGGGTGGTGGAAATAATGTTCGTCCTCCATTTTAA 996 0.5904 MDPVAAQGRPLPPPFLTRDLHLHHPHPHHQFQTHHHTNNNNNNHHHSADNNDDHNNNNNLSRGQKRDHDDITADNNNNNKEFGANHNTDTTGSGDGGGENSGRRPRGRPAGSKNKPKPPIIITRDSANALRSHVMEIGNGGDIMESVATFARRRQRGVCILSGGGTVTNVTLRQPASPGAVVTLHGRFEILSLSGSFLPPPAPPAASGLAIYLSGGQGQVVGGTVVGPLIASGPVVIMAASFGNAAYERLPLEEEEAVAAGGGSGGGLGSPPPGIVGQQQQQPQHHQQQQQQIVGDAANNFLGVNNQNLMSSCQLPAEGFWGGGNNVRPPF 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0965 331 MobiDBLite consensus disorder prediction 76 97 - -
Mibi11g0965 331 SUPERFAMILY AF0104/ALDC/Ptd012-like 127 258 - -
Mibi11g0965 331 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 44 295 IPR014476 GO:0003680
Mibi11g0965 331 Gene3D - 130 259 - -
Mibi11g0965 331 MobiDBLite consensus disorder prediction 59 75 - -
Mibi11g0965 331 MobiDBLite consensus disorder prediction 274 292 - -
Mibi11g0965 331 ProSiteProfiles PPC domain profile profile. 127 264 IPR005175 -
Mibi11g0965 331 FunFam AT-hook motif nuclear-localized protein 130 257 - -
Mibi11g0965 331 MobiDBLite consensus disorder prediction 1 120 - -
Mibi11g0965 331 MobiDBLite consensus disorder prediction 257 292 - -
Mibi11g0965 331 PIRSF ESCAROLA 16 331 IPR014476 GO:0003680
Mibi11g0965 331 Pfam Plants and Prokaryotes Conserved (PCC) domain 131 243 IPR005175 -
Mibi11g0965 331 CDD DUF296 131 198 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0965 Mibi-ChrMibi11 25569361 25570356 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0965 1 331 AT-hook Motif Nuclear Localized (AHL) Family AT2G45430 58.187 4.14e-77 237