Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0946 ATGGCTTCCACCGCCGCCTACTCCGCCGTCCTCCTCCTCCTCTCGATCTCCGGCATCTTTTGTAGCCATGACATGGAGCTGCTTCAAATGGCTCACACCCAAGTTGTTCAAGCTAGGACTTGGGTTGAGAGTCGTCATCATCATGATGTTAACTTCGTCAGCTCAATGGCTTCATCGTCATCGTCATCATTGTATGTAGCACTCAAAGATTGTGCTAAGCTTTATGAAGAGAGTGAGCACAGGTTAAATCAATTGGTATCAGAGTCAGGTTATCACGAAGACGAAGAAGAAGATGATGGTGCGAGGGTTATAACGTGGGTGAGTGGTGTAATAACTAACCATAGGACGTGTTTGGATGGGTTGGAGGAGAAAGGGTATTATAAGGACGTGGAAGCTGAGGGAGGTTTACATAAAAATTTGACTTTATCTCTTCAAGAGGCTCTTCAGTTATTTGTGAAGAACAAGCAGCACAGAGTCAAAGCCAAAGCAAAAGCAAAAAGAGCACCAAGAAAGGGGAACATATCAAAATCATACGGTGGCCGATTAGCATCATGGAATCCGACAGAATCAAAGGCACATTTCACGGTGGCTCAAGACGGCTCCGGCAGCCACAAAACCATCGGAGCCGCCATTGAAGCAGTAACCTCAATGGGTCACAATCGTCCAGCAAGAGTCATCATCCACGTCAAAGCAGGAATCTACAACGAAAAGGTTGAAATTGGATTCAAACTCAAGAACTTAATGCTCGTCGGAGATGGCATTGACAAAACTATCATCACCGGCTCTAGAAGCGTCGCCGGCGGCTCCTCCACCGTCGGCTCCGCCACATTCGATGTATCTGGTGATGGATTTTGGGGAAGAGACTTAACAATAGAGAACAAAGCAGGTCCACAAGATCATCAAGCAGTAGCCATGAAGGTAAGCTCAGACCTCTCCGTCTTCTACAGATGCAGCTTCAAAGGCTACCAAGACACACTCTACACACATTCCAACCGTCAATTCTACAGAGACTCCATCATCTCCGGCACCGTTGACTTCATCTTCGGCGACGCCTCCGTCATATTCCAAAACTGTGACATCATCCTACGTAAGCCAATGTCTCACCAAGCCACATTCATCACAGCACAAGGAAGATCAGACCCAAATCAACCAACAGGGATTGTTATACAGAATTGTAAGATAAAACCAGAGGAGGGATTCGTGGGTACGAGGAATTTTCTTGGTAGGCCATGGAAGAAGTATGCTAGGACAGTGTTCATGAAGAGTGATTTGGATGGGTGTATTGATCCTAGGGGATGGAGTGAATGGAGTGGTGGGTTTGCTTTGTCTACTCTGTTTTATGCAGAGTATATGAATGAGGGTGAAGGGTCTTCTACTGAGAATAGAGTTAAGTGGCCTGGTTTTCATGTCTTGCGTTCTGCTTCTGAGGTTAGGCCTTTCTCTGTTGATGAGTTCCTGCGTGGAGATCGGTGGATTCCGGCCACCGGAGTTCCGTTCTCCGCCGGTGTTTGA 1512 0.4696 MASTAAYSAVLLLLSISGIFCSHDMELLQMAHTQVVQARTWVESRHHHDVNFVSSMASSSSSSLYVALKDCAKLYEESEHRLNQLVSESGYHEDEEEDDGARVITWVSGVITNHRTCLDGLEEKGYYKDVEAEGGLHKNLTLSLQEALQLFVKNKQHRVKAKAKAKRAPRKGNISKSYGGRLASWNPTESKAHFTVAQDGSGSHKTIGAAIEAVTSMGHNRPARVIIHVKAGIYNEKVEIGFKLKNLMLVGDGIDKTIITGSRSVAGGSSTVGSATFDVSGDGFWGRDLTIENKAGPQDHQAVAMKVSSDLSVFYRCSFKGYQDTLYTHSNRQFYRDSIISGTVDFIFGDASVIFQNCDIILRKPMSHQATFITAQGRSDPNQPTGIVIQNCKIKPEEGFVGTRNFLGRPWKKYARTVFMKSDLDGCIDPRGWSEWSGGFALSTLFYAEYMNEGEGSSTENRVKWPGFHVLRSASEVRPFSVDEFLRGDRWIPATGVPFSAGV 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0946 503 Gene3D - 187 503 IPR012334 -
Mibi11g0946 503 Pfam Plant invertase/pectin methylesterase inhibitor 50 130 IPR006501 GO:0004857
Mibi11g0946 503 ProSitePatterns Pectinesterase signature 2. 340 349 IPR033131 -
Mibi11g0946 503 CDD PMEI-like_4 27 154 - -
Mibi11g0946 503 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 52 128 IPR035513 -
Mibi11g0946 503 Pfam Pectinesterase 194 489 IPR000070 GO:0030599|GO:0042545
Mibi11g0946 503 PANTHER PECTINESTERASE 43 493 - -
Mibi11g0946 503 Gene3D Invertase/pectin methylesterase inhibitor family protein 26 151 IPR035513 -
Mibi11g0946 503 SUPERFAMILY Pectin lyase-like 190 502 IPR011050 -
Mibi11g0946 503 FunFam Pectinesterase 187 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0946 Mibi-ChrMibi11 25221545 25228244 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0946 10 503 Carbohydrate Esterase AT3G60730 50.954 0.0 528