Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0927 ATGAGAGCGCATGGCATCGGAGATGAAGGCGGCGCGATGGATGACGATGATGACGACGCTGCCAGCGACTGGGAAGCTGGCGTTGGGGATTGTAATAATGATAGTCCCTCCAACAAACGAATGTATGCTTTGAGGACAAACCCTAATAGGCAAAAGAGTTATTGTAGGGTTTGTGAGAATTGTGGTAAAGAGTTCTCATGTTGGAAGTCTTTTCTTGAACATGGAAAGTGCACTTCCAATGATGAAGCCGGCGACGAGTCTTCGTCGTTCGTCTCATCGCCGGGATCGGATGCCGGTGACGATATGTCCGGCCGAAGAGGTTGTGGTGGTTGGTCAAAGAGAAAGAGATCTTTTCGAGTTAAAGTTGAAGGTTTGAACAACAGCAATAATAACCCTAATTGTTCATCATCCAATGAAGATGAAGACTTAGCTAACTGCTTGATGATGCTTTCCAACGCTACCGTCGATCTTCCTGACGATTCTTCGGCAGCTTTCACGGCGGGGAAAGACGAAGAGAGAAGAAACCCTAATTTTAGCTTTATGGCTCCAATGACATCATCACAAGTCGCTTCATATCATAATATCAAAGCCAAAGATGTAGGCAATAGCAGTAATATTAATAGTAAGGGTCTGTTTGAATGCAAAGCATGCAAGAAAGTGTTCAATTCCCATCAAGCATTGGGTGGTCATAGAGCCAGCCACAAGAAAGTCAAAGGCTGCTTCGCCGCTCGCCTTGACAACCTTGATGCCGAGGCTGACGATGACATCATCAACCATGAGGATAAACTCTTCTTATCCAACAAATCGAACAATTCAACCCACCTTCGCTTTGATCATGGCTCCAACAGTAATAATGCCTCATTATCTAAGAGGAAATCCAAAGTCCATGAATGTTCGATATGTCACCGAGTTTTCACGTCGGGACAGGCACTAGGAGGTCACAAAAGGTGTCATTGGATCACATCAAATGCGCCAGACACATCGACACTGGCTAGATTTCAACAATTTCATGACCACATAGAACATCACATGATGAACAACAATAATCCAATTGTTGTACCTAACAAGTTTGAAGAGGACTCTGACCCGATTCATCTAAAGCTCGATCTCAATCTCCCGGCAGCTCCGGTGACAACGCGCAATGTCGTCACTGAAATCTACTTACAGCCATGGATAGGTGGAGGAGGAATGAAGCAGCGTAAAGATGAGAGTAGTCAAAGCCATTTTGATGAATTAGAAGGCAAGAATAGTAACAAAAACCTCAATTTTAACAATGGTTCCTCCATGCATAACAACGTGGAGGATGATGAAGCAGAGAGCAAGGTGAAGTTAGCAAAACTGAGTGAACTAGAAGACATGGACGTAGAAGGGAGTTCTTCGCCATGGTTACAGGTGGGAATTGGTTCCAATAATACAGCTAACGTGGGAACTGACCCATGA 1440 0.4451 MRAHGIGDEGGAMDDDDDDAASDWEAGVGDCNNDSPSNKRMYALRTNPNRQKSYCRVCENCGKEFSCWKSFLEHGKCTSNDEAGDESSSFVSSPGSDAGDDMSGRRGCGGWSKRKRSFRVKVEGLNNSNNNPNCSSSNEDEDLANCLMMLSNATVDLPDDSSAAFTAGKDEERRNPNFSFMAPMTSSQVASYHNIKAKDVGNSSNINSKGLFECKACKKVFNSHQALGGHRASHKKVKGCFAARLDNLDAEADDDIINHEDKLFLSNKSNNSTHLRFDHGSNSNNASLSKRKSKVHECSICHRVFTSGQALGGHKRCHWITSNAPDTSTLARFQQFHDHIEHHMMNNNNPIVVPNKFEEDSDPIHLKLDLNLPAAPVTTRNVVTEIYLQPWIGGGGMKQRKDESSQSHFDELEGKNSNKNLNFNNGSSMHNNVEDDEAESKVKLAKLSELEDMDVEGSSSPWLQVGIGSNNTANVGTDP 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0927 479 ProSitePatterns Zinc finger C2H2 type domain signature. 214 234 IPR013087 -
Mibi11g0927 479 ProSiteProfiles Zinc finger C2H2 type domain profile. 212 239 IPR013087 -
Mibi11g0927 479 MobiDBLite consensus disorder prediction 394 479 - -
Mibi11g0927 479 MobiDBLite consensus disorder prediction 416 431 - -
Mibi11g0927 479 SMART c2h2final6 296 318 IPR013087 -
Mibi11g0927 479 SMART c2h2final6 212 234 IPR013087 -
Mibi11g0927 479 PANTHER OS02G0659100 PROTEIN 1 471 - -
Mibi11g0927 479 SUPERFAMILY beta-beta-alpha zinc fingers 211 318 IPR036236 -
Mibi11g0927 479 MobiDBLite consensus disorder prediction 432 453 - -
Mibi11g0927 479 ProSitePatterns Zinc finger C2H2 type domain signature. 298 318 IPR013087 -
Mibi11g0927 479 MobiDBLite consensus disorder prediction 462 479 - -
Mibi11g0927 479 MobiDBLite consensus disorder prediction 82 96 - -
Mibi11g0927 479 MobiDBLite consensus disorder prediction 1 39 - -
Mibi11g0927 479 ProSiteProfiles Zinc finger C2H2 type domain profile. 296 318 IPR013087 -
Mibi11g0927 479 Pfam C2H2-type zinc finger 295 320 - -
Mibi11g0927 479 Pfam C2H2-type zinc finger 212 236 - -
Mibi11g0927 479 MobiDBLite consensus disorder prediction 80 112 - -
Mibi11g0927 479 MobiDBLite consensus disorder prediction 401 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0927 Mibi-ChrMibi11 24955778 24957217 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0927 93 395 C2H2 Transcription Factor Family AT1G02040 33.663 7.70e-36 134