Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0912 ATGATTGTTGTCCAATACAAAGGAGAGGAGAAGCAGTTTGCAGCTGAAGAGATTTCTTCAATGGTGTTGACGAAAATGAAGGAAGTGGCTGAGGCTTATTTGGGGCAAAATGTGAAGAATGCTGTGGTTACTGTTCCTGCTTATTTCAATGATTCTCAGAGACAGGCTACTAAAGATGCTGGTGCTATTGCTGGGCTTAATGTCATGAGGATAATCAATGAGCCAACTGCTGCTGCTATTGCCTATGGTTTGGACAAGAAGGCTTCGAGGTCTGGTGAGCAGAATGTTCTTATCTTTGATCTTGGAGGTGGCACTTTTGATGTGTCATTGCTCACAATTGAAGAGGGGATCTTTGAGGTGAAGGCTACTGCTGGTGATACTCACTTGGGTGGTGAAGATTTTGACAATAGGCTTGTGAATCACTTTGTGCAAGAGTTCAAGAGGAAGCACAAGAAGGATATTAGTACAAATGCTAGAGCTTTGAGGAGACTGAGGACTGCTTGTGAGAGGGCAAAGAGGACTCTTTCTTCAACAGCTCAGACAACAATTGAGATTGATTCTCTCTATGAAGGTATTGATTTCTACTCTACCATTACGAGAGCTAGGTTCGAGGAATTGAACATGGACTTGTTCAGAAAATGCATGGAGCCTGTGGAGAAATGTCTTAGGGATTCTAAGATTGACAAGAGTAGCGTTCATGAGGTTGTTCTTGTTGGTGGTTCTACAAGGATCCCAAAAGTACAGCAGCTTCTTCAGGATTTCTTCAATGGAAAAGAGTTGTGCAAGAGCATCAACCCAGATGAAGCCGTGGCTTATGGAGCCGCAGTGCAAGCTGCAATTCTGAGTGGTGAAGGGAATGAGAAAGTTCAAGACTTGCTTCTGCTTGATGTCACTCCTCTCAGCCTTGGACTTGAAACTGCAGGAGGTGTCATGACAGTTCTCATACCAAGAAACACAACAATTCCCACCAAGAAGGAACAGATTTTCTCCACATATTCTGATAATCAGCCCGGTGTTCTAATTCAGGTGTATGAAGGAGAGAGGGCAAGAACTAAGGACAACAACTTGCTCGGGAAATTTGAGCTTTCCGGGATCCCTCCGGCGCCAAGAGGAGTTCCTCAGATCAATGTATGCTTTGACATTGATGCAAATGGCATATTGAACGTGTCAGCTGAGGATAAAACAGCAGGAGTGAAGAATAAGATTACTATTACAAATGACAAAGGAAGGTTGAGCAAAGAAGAGATTGAGAGGATGGTGCAAGAGGCAGAGAAGTACAAGGCACAAGATGAGGAAGTGAAGAAGAAGGTGGAAGCCAAGAACTCTCTGGAGAACTATGCCTATAACATGAGGAACACTATCAAGGATGAGAAAATTGCAGGTAAATTGGACCCAGCAGATAAGCAGAAGATTGAGAAGGCAGTTGATGAAACAATTGAGTGGCTTGATGGAAACCAATTAGCAGAGGTGGATGAATTTGAGGACAAATTGAAAGAATTGGAAGGTTTATGCAACCCCATTATAGCAAAGATGTATCAAGGCGGTGGCGGCGATGTGCCCATGGACGGCGGTGCAAGCATGCCTAATGGTGGTTATGGCAAATCATCCTCTGCTGGTGATGCTACTGGACCAAAGATTGAAGAAGTTGATTGA 1653 0.438 MIVVQYKGEEKQFAAEEISSMVLTKMKEVAEAYLGQNVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYGLDKKASRSGEQNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVQEFKRKHKKDISTNARALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSSVHEVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTAGVKNKITITNDKGRLSKEEIERMVQEAEKYKAQDEEVKKKVEAKNSLENYAYNMRNTIKDEKIAGKLDPADKQKIEKAVDETIEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQGGGGDVPMDGGASMPNGGYGKSSSAGDATGPKIEEVD 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0912 550 PANTHER HEAT SHOCK PROTEIN 70KDA 1 478 IPR013126 GO:0005524|GO:0140662
Mibi11g0912 550 Gene3D Actin; Chain A, domain 4 130 213 - -
Mibi11g0912 550 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 287 444 IPR029047 -
Mibi11g0912 550 FunFam Heat shock 70 kDa protein 94 155 - -
Mibi11g0912 550 Gene3D - 440 550 IPR029048 -
Mibi11g0912 550 ProSitePatterns Heat shock hsp70 proteins family signature 3. 235 249 IPR018181 -
Mibi11g0912 550 FunFam Heat shock 70 kDa 130 213 - -
Mibi11g0912 550 Gene3D - 22 279 - -
Mibi11g0912 550 Gene3D - 87 261 - -
Mibi11g0912 550 MobiDBLite consensus disorder prediction 514 550 - -
Mibi11g0912 550 ProSitePatterns Heat shock hsp70 proteins family signature 2. 98 111 IPR018181 -
Mibi11g0912 550 FunFam Heat shock cognate 70 kDa protein 2 214 261 - -
Mibi11g0912 550 FunFam Endoplasmic reticulum chaperone BiP 6 93 - -
Mibi11g0912 550 FunFam Heat shock 70 kDa 286 440 - -
Mibi11g0912 550 Pfam Hsp70 protein 3 513 IPR013126 GO:0005524|GO:0140662
Mibi11g0912 550 Coils Coil 413 440 - -
Mibi11g0912 550 FunFam heat shock cognate 70 kDa protein-like 440 514 - -
Mibi11g0912 550 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 438 517 IPR029048 -
Mibi11g0912 550 Gene3D - 2 21 - -
Mibi11g0912 550 SUPERFAMILY Actin-like ATPase domain 92 283 IPR043129 -
Mibi11g0912 550 PRINTS 70kDa heat shock protein signature 372 388 - -
Mibi11g0912 550 PRINTS 70kDa heat shock protein signature 104 114 - -
Mibi11g0912 550 PRINTS 70kDa heat shock protein signature 232 248 - -
Mibi11g0912 550 PRINTS 70kDa heat shock protein signature 291 310 - -
Mibi11g0912 550 PRINTS 70kDa heat shock protein signature 264 284 - -
Mibi11g0912 550 PRINTS 70kDa heat shock protein signature 41 61 - -
Mibi11g0912 550 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 286 439 IPR029047 -
Mibi11g0912 550 SUPERFAMILY Actin-like ATPase domain 2 86 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0912 Mibi-ChrMibi11 24737920 24739572 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0912 1 524 Calmodulin-binding Proteins AT3G12580 90.649 0.0 979