Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0909 ATGAAAAGTACATCGCTATGGATGCTCTCTTTGTATGTGTTTGTTTCGTTCATTACTGCAGTTAGCGACTCAGCACAGGATGTTGCAGACCGCGTTGATAATTCAGGTTCCATTAGCATAGACTGTGGGGCAAGCAGAGATTACGTGGATGAAGTAACCAGGATTTGGTACCAAACCGATGAAGGCTTCATTGAAAGCGGAACCAATCTTGAAGTGGCCTCTGACGTCAACTTCGACATTTATGCTCCAGCCATAAACCAACAACTAATGACATTGAGAAATTTCCCAGAGGGAGAAAGAAACTGTTACACTCTGAAACCAAAACAAGAGAGGCAAAAGCAAAAGTATATGATAAGAGCCATATTTGCATATGGCAATTATGACTCCAAAAGGCGAGTTCCTGTGTTCGACCTTTACCTTGGGGTTAATTATTGGACCACACTTCGAACATATCCTACTTCTGCATATCCTAGCCAAATCTATCCGTTGGAGATAATAATGGAGCATGATATTAGCATAGAAACAATACAAGTGTGCTTAATGAACACAGGACAAGGCACACCTTTCATTAACGCTTTGGAATTAAGGCCATTGAACAACTCTCTCTATCCTGCTCCTCATCCCCTTATTATTGATTGTATTGATTCTGGAAGACAAGACTTGGGCACTCGGCACCTGCGCACTTGGACCAGGTTCAAAAACGATGTATACGATCGCTTGTGGTACAACGATGATAATTCTGATTGGGATGTCTTACAAACAAGTATAGAAGCAAAGGCAGAGGACTCCATTTATGAACTTCCAACAGAAGTACTACGCACTGCACAAAAACCCTGGAATCATTCCAATATCTTAACTGCCAATTGGACCATTTACGATATATCCCACCAATATTATATGTTTCTTCACTTTGCTGAAATTCAAAAGCTTCCTCCTGGCCACAAGAGGATCATCAATGTCACTTTTGATGAAGATGAAAATCCTATTACCCTTGAATATTTGAAGCCTATTACTCTAAGCTTCAACAAGATCACTAAAGATAATTACATAAGGTTCACAATTAGAGCGGCACCTGATTCAGATGCTCCTCCAATCCTAAATGCATTTGAAATTTATAAAGCCATCCCGCAACAAAATTCCCCGACGGCTGCAGAAGATGTTAAAGCTATCATGGAAATCAAGCATATCTATGGGGTCTCCAAAATCGGTTGGCAAGGTGATCCATGTGTTCCATATAACTTTGCTTGGGACTCTTTGACATGCAGTTATGGCAATAATATAAGAATCATGTCATTGAACTTGAGCTCAAGCAAACTCACTGGAGTGATAGCTACATCGTTTGCTAGGTTGGAAAAATTGGAGTCCTTGAAGTCCTCATCTGTCATTGTTAGAAACCTGGGCGGATTATTGTCAGATAAAAACAAGAATGTATTAAAGTGGAGCGAAAGACTTCAAGTTGCTGTTGATGCAGCAAAAGGATTGGAATATCTTCATAATGGTTGTAAGACTCCTATAATTCATAGAGACTTGAAGCCATCCAACATTTTATTGAACAAATTCATGGTAGCAAAAATTGCTGACTTTGGATTGTCTAGAGCATTCAAAAATGAAAGAGATTCTCATCTGTCAACTCAGCCAGCTGGTACACTTGGTTATATTGATCCTGAGTAA 1671 0.3974 MKSTSLWMLSLYVFVSFITAVSDSAQDVADRVDNSGSISIDCGASRDYVDEVTRIWYQTDEGFIESGTNLEVASDVNFDIYAPAINQQLMTLRNFPEGERNCYTLKPKQERQKQKYMIRAIFAYGNYDSKRRVPVFDLYLGVNYWTTLRTYPTSAYPSQIYPLEIIMEHDISIETIQVCLMNTGQGTPFINALELRPLNNSLYPAPHPLIIDCIDSGRQDLGTRHLRTWTRFKNDVYDRLWYNDDNSDWDVLQTSIEAKAEDSIYELPTEVLRTAQKPWNHSNILTANWTIYDISHQYYMFLHFAEIQKLPPGHKRIINVTFDEDENPITLEYLKPITLSFNKITKDNYIRFTIRAAPDSDAPPILNAFEIYKAIPQQNSPTAAEDVKAIMEIKHIYGVSKIGWQGDPCVPYNFAWDSLTCSYGNNIRIMSLNLSSSKLTGVIATSFARLEKLESLKSSSVIVRNLGGLLSDKNKNVLKWSERLQVAVDAAKGLEYLHNGCKTPIIHRDLKPSNILLNKFMVAKIADFGLSRAFKNERDSHLSTQPAGTLGYIDPE 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0909 556 ProSiteProfiles Protein kinase domain profile. 304 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g0909 556 PANTHER OS07G0107800 PROTEIN-RELATED 38 459 - -
Mibi11g0909 556 ProSitePatterns Serine/Threonine protein kinases active-site signature. 505 517 IPR008271 GO:0004672|GO:0006468
Mibi11g0909 556 Gene3D Transferase(Phosphotransferase) domain 1 464 556 - -
Mibi11g0909 556 Pfam Malectin-like domain 40 373 IPR024788 -
Mibi11g0909 556 SUPERFAMILY Protein kinase-like (PK-like) 466 556 IPR011009 -
Mibi11g0909 556 FunFam Os07g0541700 protein 462 549 - -
Mibi11g0909 556 Pfam Protein kinase domain 475 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0909 Mibi-ChrMibi11 24559993 24573363 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0909 473 556 Receptor kinase-like Gene Family AT1G51880 60.714 2.19e-27 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Mibi11g0909 Malectin_like 7.3e-80 CL0202
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi11g0909 11 24559993 24573363 Mibi04g0536 04 10369136 10376041 CCT
Mibi11g0909 11 24559993 24573363 Mibi11g0909 11 24559993 24573363 ECH