Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0908 ATGGGCAACAATCCAGGTCTTTGTTTGTCAAATTCATGCAAAGAAGAGAAAAAACATAAGAAGTTTGTGATTACACTTATTGCATCACTTTCAACTTTGGTCATCGTTACTGTCCTTGTATCTTTGGTGATCTGGAGATTTAAAAAGAAAACAGTTTTGTCAGCGGAATCTCGGAAGAAGAATGTTGTAAAACAAAAGAATCAAGCATTTTCTTACTCTGAGGTTCTCCGCATCACAAACAATTTCGAAACTACAATTGGAGAAGGAGCGTTCGGCAAAGTATACCTTGGAACTTTAAAAGATGATACGCAGGTTGCTGTGAAGTTACTTTCCCCATCTTCAAGACAAGGGTATAAGGAATTTCAATCAGAGGTTAGAAATAAAAACCTCTCCGAACTATTGTCAGAGAAAAACAAGAATGTGTTGAAGTGGAGCGAGAGACTTCAAGTTGCTGTTGATGCAGCAAAAGGTTAG 474 0.3755 MGNNPGLCLSNSCKEEKKHKKFVITLIASLSTLVIVTVLVSLVIWRFKKKTVLSAESRKKNVVKQKNQAFSYSEVLRITNNFETTIGEGAFGKVYLGTLKDDTQVAVKLLSPSSRQGYKEFQSEVRNKNLSELLSEKNKNVLKWSERLQVAVDAAKG 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0908 157 ProSitePatterns Protein kinases ATP-binding region signature. 86 108 IPR017441 GO:0005524
Mibi11g0908 157 ProSiteProfiles Protein kinase domain profile. 80 157 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g0908 157 Gene3D Phosphorylase Kinase; domain 1 61 144 - -
Mibi11g0908 157 PANTHER OS07G0107800 PROTEIN-RELATED 12 157 - -
Mibi11g0908 157 SUPERFAMILY Protein kinase-like (PK-like) 67 157 IPR011009 -
Mibi11g0908 157 Pfam Protein tyrosine and serine/threonine kinase 82 126 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0908 Mibi-ChrMibi11 24530893 24532869 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0908 1 157 Receptor kinase-like Gene Family AT2G19230 38.095 2.96e-34 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Mibi11g0908 PK_Tyr_Ser-Thr 5.8e-06 CL0016