Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0904 ATGAAAACAGTTTTGTCCCCGGAATCTCGGAAGCAGAATGTTGAAAAACAAAAGAATCAAGCATTTTCTTACTCTGAGGTTGTCCATATCACAAACAATTTTGAAACTACAATTGGAGAAGGAGGGTTCGGCAAAGTTTACCTCGGCACTTTAAAAGATGATACGCGGGTTGCTGTGAAGTTACTTTCCCCATTTTCAAGACAAGGGTATAAGGAATTTCAATCAGAGGCTCAACTCTTAACAGTCATTCATCATAGAAACTTAGTTTCACTTGTTGGGTTTTGTGATGAAAACGACGTCAAAGCATTGATTTATGAATATATGGACCTTGGAGACCTCTCCGAACTATTGTCAGAGAAAAGCAAGAATGTGTTAAAGTGGAGCGAGAGACTTCAAGTTGTTGTTGATACAGCAAAAGGACTGGATTATCTTCATAATGGCTTGTCTGGAATCACAAATAAAAGAAGTGACATTTATAGCTTTGGGATGATTCTTCTTCAACTAATCACAGGCCGTCCTCCAATAAGAAGAGAAATTGGAAATCTTTGTTATACTATTGATTGGGTTCGTTCAAAAGTTGAATGCGGGGACATTCATGGCATTATTGATCCAAGATTGGAAGGAGAATTCCATGTAGCTTCTGCATGGAAACTAGTTGAGATAGCAATGTCATGCGTTGTACCAGATTCCAAACAAAGGCCGGACATAGTTTTTGTGTTGCAAGAACTGAATGAATGCTTATATTTGGAGATGAATCATGCCAAATCAAATAGTTTGTCAAGCTATCCAAGCAATCATAGTGGACAGTTTGATTCTGTGACCAACCCCTCAGCTAGGTAG 840 0.3857 MKTVLSPESRKQNVEKQKNQAFSYSEVVHITNNFETTIGEGGFGKVYLGTLKDDTRVAVKLLSPFSRQGYKEFQSEAQLLTVIHHRNLVSLVGFCDENDVKALIYEYMDLGDLSELLSEKSKNVLKWSERLQVVVDTAKGLDYLHNGLSGITNKRSDIYSFGMILLQLITGRPPIRREIGNLCYTIDWVRSKVECGDIHGIIDPRLEGEFHVASAWKLVEIAMSCVVPDSKQRPDIVFVLQELNECLYLEMNHAKSNSLSSYPSNHSGQFDSVTNPSAR 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0904 279 MobiDBLite consensus disorder prediction 259 279 - -
Mibi11g0904 279 Gene3D Transferase(Phosphotransferase) domain 1 106 150 - -
Mibi11g0904 279 FunFam Leucine-rich repeat receptor-like protein kinase 10 107 - -
Mibi11g0904 279 Gene3D Phosphorylase Kinase; domain 1 5 105 - -
Mibi11g0904 279 PANTHER OS07G0107800 PROTEIN-RELATED 151 251 - -
Mibi11g0904 279 SUPERFAMILY Protein kinase-like (PK-like) 14 243 IPR011009 -
Mibi11g0904 279 Gene3D Transferase(Phosphotransferase) domain 1 151 265 - -
Mibi11g0904 279 ProSiteProfiles Protein kinase domain profile. 32 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g0904 279 Pfam Protein tyrosine and serine/threonine kinase 34 146 IPR001245 GO:0004672|GO:0006468
Mibi11g0904 279 ProSitePatterns Protein kinases ATP-binding region signature. 38 60 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0904 Mibi-ChrMibi11 24466749 24469262 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0904 18 262 Receptor kinase-like Gene Family AT1G51890 39.145 1.28e-61 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Mibi11g0904 PK_Tyr_Ser-Thr 1.3e-24 CL0016