Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0890 ATGTCGGCCTCATCATCTTCCACTTGTTCCTTTTCACCAGACCACCACCTCTCTCCCTCCGACCAGCTTTGCTATGTCATTTGCCATTTTTGTGACACTGTTCTCGCTGTCAGTGTTCCTTGCAACAGCTTACTGAAGACAGTTACAGTGAGATGCGGCCATTGCACCAACCTTCTGTCTGTGAACATGCGTGGCCTTCTTCTTCCTTCTCCCAATCAGCTTCATCTTGGACACACTTTCTTCCCCCCTCAAAATCTCCTGGAGGAGATTCGAAATGCACCATCTTCAAACATGCAAATGATGAGCCATCATCATCAGCTTCCATATCCAAATGACTCAGTTATGAGCACCATGAGAGGTGGAGGAGGCGGCGGCGGCGGCGGAGGACTCGAGGAAATCCCTAAGCCTCCACCACCGGCAGCTAATAGACCTCCAGAAAAGAGACAGAGAGTTCCATCTGCTTACAACCGCTTCATCAAGGACGAGATCCAACGCATCAAAGCTGGGAATCCTGATATAAGCCACAGAGAGGCCTTTAGTGCAGCTGCAAAGAATTGGGCCCATTTCCCTCACATACACTTCGGACTTATGCCTGATCATCAACCCGTGAAGAAAGCTAACGTGCGCCAGGAAGGAGAAGACGTGCCTATGAAAGAGGGGTTTTTGGGTCCCACAAATGTAGAGGATATGGATTGTGATATGAAGTCTGGTGACTAG 717 0.4937 MSASSSSTCSFSPDHHLSPSDQLCYVICHFCDTVLAVSVPCNSLLKTVTVRCGHCTNLLSVNMRGLLLPSPNQLHLGHTFFPPQNLLEEIRNAPSSNMQMMSHHHQLPYPNDSVMSTMRGGGGGGGGGGLEEIPKPPPPAANRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQPVKKANVRQEGEDVPMKEGFLGPTNVEDMDCDMKSGD 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0890 238 MobiDBLite consensus disorder prediction 118 150 - -
Mibi11g0890 238 MobiDBLite consensus disorder prediction 210 238 - -
Mibi11g0890 238 SUPERFAMILY HMG-box 136 190 IPR036910 -
Mibi11g0890 238 Gene3D High mobility group box domain 137 192 IPR036910 -
Mibi11g0890 238 FunFam Axial regulator YABBY 141 213 - -
Mibi11g0890 238 PANTHER PROTEIN YABBY 6-RELATED 5 208 IPR006780 GO:0007275
Mibi11g0890 238 Pfam YABBY protein 19 196 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0890 Mibi-ChrMibi11 23916437 23921350 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0890 30 223 C2C2-YABBY Transcription Factor Family AT4G00180 63.592 8.32e-68 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Mibi11g0890 YABBY 7.4e-70 CL0114