Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mibi11g0886 | ATGGATCCCTTTAGAGGACAAGGAGGAATTCAGATGCTGTTAAATGCAGAGCAAGAAGCTCAACACATTGTTTCCAGTGCAAGAAATTTGAGAACTCAAAGATTGAAGCAGGCAAAAGAGGAAGCCGAGAGAGACGCAGCTCTGTACAAATCCCACATGGAAAGTGAATACCAAAAGACTCTTAAAGAGACTAGTGGGAGCTCTGGATCTAATGTTACAAGACTTGAAGAAGAGACTAAAGCTAAGATCAAGAATCTAAAAGCATCGTCTTCAAAGGCTTCTCCAGAAATTGTTGAAATGCTGCTCAAGCATGTCACTTCTATCAAAGTCTAA | 333 | 0.4054 | MDPFRGQGGIQMLLNAEQEAQHIVSSARNLRTQRLKQAKEEAERDAALYKSHMESEYQKTLKETSGSSGSNVTRLEEETKAKIKNLKASSSKASPEIVEMLLKHVTSIKV | 110 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mibi11g0886 | 110 | FunFam | V-type proton ATPase subunit G | 3 | 110 | - | - | |
| Mibi11g0886 | 110 | PANTHER | VACUOLAR ATP SYNTHASE SUBUNIT G | 1 | 109 | IPR005124 | GO:0016471|GO:0046961|GO:1902600 | |
| Mibi11g0886 | 110 | Gene3D | - | 3 | 110 | - | - | |
| Mibi11g0886 | 110 | TIGRFAM | V_ATP_synt_G: V-type ATPase, G subunit | 8 | 109 | IPR005124 | GO:0016471|GO:0046961|GO:1902600 | |
| Mibi11g0886 | 110 | Coils | Coil | 32 | 52 | - | - | |
| Mibi11g0886 | 110 | Pfam | Vacuolar (H+)-ATPase G subunit | 7 | 109 | IPR005124 | GO:0016471|GO:0046961|GO:1902600 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mibi11g0886 | Mibi-ChrMibi11 | 23842547 | 23843684 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mibi11g0886 | 1 | 109 | Primary Pumps ATPases(2) | AT3G01390 | 58.716 | 1.32e-34 | 113 |