Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0871 ATGGGAGGGAAGTGGAAATATGCAATTAACCGCCTAAACCGTCACGTACAATTCGAAGAAGAGAGAATACAAAACACACACACAGTCACAAAGAAAACACAGACATTTTTCTCGCAGACAGAAATAGAGAGAGAGAGAGAGATGCAAGTGAAGAAGAAGGATCAAGGTCCAATAAGGAAAGGGCCATGGAAATCCGAAGAAGACGAAGTACTTCTAAGCCATGTGAACAAGTATGGCCCCAGAGACTGGAGCTCCATTCGATCCAAAGGCCTTCTTCAACGAACTGGAAAATCTTGTCGTCTTCGTTGGGTCAATAAGCTTCGACCTAATCTCAAGAATGGGTGCAAATTTTCGGTGGAGGAAGAGAGGGTGGTGATTGAGTTGCAGGCACAATTTGGGAACAAATGGGCAAAGATTGCGTCTTATTTGCCAGGAAGGACTGATAATGATGTGAAGAATTTCTGGAGTAGTAGGCAAAAGAGGATCGCTAGGATTCTTAATGCTTCACCTCCTTCATCTAAATCCAAATCCAAATCCAATAAGAACAAAAATAAAGTCCCCTGTTTCCACAATGTTCCCCATCTGGAGGCTCCTAAGTTTAGTTCTTCATCTGAGGAAGGATCTTCATCAAAGGCTGATCATCATCAGCCACGCTCATCATCATCCTTTGCTGAGAAGAGTTCAGAGGTCGTAAAGATGGTGCCATTGCCAGATCTCATGAACTCCTCCACAAAACCCTCGAGTTCTGACACGGTCAGCGGGACCAAAGAAGAGTTTTTGACGCCGCCATTCGAGAGCTATGTGAGCAATGAAATCATAAGCTCAGGAATTGGTTTCCCTCAGATTTTCCCATTCTTCTCATCAATGGAAAGTCAAGAAGATGATCTCTTCTTGGCCACAGTTAATGATGAGCCAGCTAATTTCATTGGTGGATTAGGAGACCCTATGGTTGATGATGATGCATCAGAACTTGCTGGAATAGGAGGAACACAGATTCCCTTATTAGGGTTTACTAATTTCTATGATCCATCAGGAAGTTTCAGAATTGGGACTTCAAAGGATCCAAATGGTAACAATAACCCCACAAACCCAGAAAGCTTCTTTGATGATTTTCCAGATGATATGTTTGATCATTTTCAGACACCTCCAAGCCCACCATCATCATCAGAGATGTGA 1176 0.4294 MGGKWKYAINRLNRHVQFEEERIQNTHTVTKKTQTFFSQTEIEREREMQVKKKDQGPIRKGPWKSEEDEVLLSHVNKYGPRDWSSIRSKGLLQRTGKSCRLRWVNKLRPNLKNGCKFSVEEERVVIELQAQFGNKWAKIASYLPGRTDNDVKNFWSSRQKRIARILNASPPSSKSKSKSNKNKNKVPCFHNVPHLEAPKFSSSSEEGSSSKADHHQPRSSSSFAEKSSEVVKMVPLPDLMNSSTKPSSSDTVSGTKEEFLTPPFESYVSNEIISSGIGFPQIFPFFSSMESQEDDLFLATVNDEPANFIGGLGDPMVDDDASELAGIGGTQIPLLGFTNFYDPSGSFRIGTSKDPNGNNNPTNPESFFDDFPDDMFDHFQTPPSPPSSSEM 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0871 391 Gene3D - 115 188 - -
Mibi11g0871 391 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 103 IPR017930 -
Mibi11g0871 391 FunFam MYB transcription factor 60 112 - -
Mibi11g0871 391 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 108 163 IPR017930 -
Mibi11g0871 391 MobiDBLite consensus disorder prediction 240 256 - -
Mibi11g0871 391 FunFam Transcription factor GAMYB 115 188 - -
Mibi11g0871 391 Gene3D - 60 112 - -
Mibi11g0871 391 MobiDBLite consensus disorder prediction 165 256 - -
Mibi11g0871 391 CDD SANT 62 107 IPR001005 -
Mibi11g0871 391 CDD SANT 116 155 IPR001005 -
Mibi11g0871 391 Pfam Myb-like DNA-binding domain 116 155 IPR001005 -
Mibi11g0871 391 ProSiteProfiles Myb-like domain profile. 55 107 IPR001005 -
Mibi11g0871 391 SMART sant 59 109 IPR001005 -
Mibi11g0871 391 SMART sant 113 161 IPR001005 -
Mibi11g0871 391 SUPERFAMILY Homeodomain-like 58 155 IPR009057 -
Mibi11g0871 391 MobiDBLite consensus disorder prediction 348 391 - -
Mibi11g0871 391 PANTHER TRANSCRIPTION FACTOR DUO1 51 387 - -
Mibi11g0871 391 MobiDBLite consensus disorder prediction 348 366 - -
Mibi11g0871 391 Pfam Myb-like DNA-binding domain 63 113 - -
Mibi11g0871 391 ProSiteProfiles Myb-like domain profile. 116 159 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0871 Mibi-ChrMibi11 23599960 23602026 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0871 46 385 MYB Transcription Factor Family AT3G60460 43.478 2.62e-72 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi11g0871 Myb_DNA-bind_6 3.4e-11 CL0123