Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0856 ATGGAAAGTGATGCCCAAGACAGCTTTGGATCATCCTCTTCATCTCCATCATCATGTTCTTCTTCTTCATCATCATCAAACTCAGATTCTTCAGGTACCAAGAGAGACTCAACAAGTGTCGTTTCAGATGAGAATGGTGATTCTTCTAGCAACAACAACAACAAGAAGAAGCAGATCAAAAGTGAAGAAAAGGATAAAATTAACAACAATAAAAAAAATAATGATGATATTAAGCATCCAGCTTACAGAGGAGTGAGAATGAGGAATTGGGGGAAATGGGTCTCTGAGATTCGTGAGCCAAAAAAGAAATCAAGGATATGGCTTGGAACTTACCCTACTGCAGAAATGGCGGCTCGAGCTCATGATGTGGCGGCTTTAGCCATCAAAGGTCATTCGGCTTACCTCAATTTCCCTCACTTGGCTCCTCAGCTTCCCCGGCCGGCCACCGCGGCTCCGAAGGACATCCAAGCCGCCGCCGCAAAAGCCGCAGCTATTGTCTTTGAGGTGGCAACTAATAAGAAGCATTGTGATGATCAAGTTGAGGAAGCTGAAGCCGAGAAAGCCAAGCCGAACCGAGCTGAGCCGGCTTCATCATGTTTGGCTCAAGATCAGTCTTCTTGTTCTTCAAAGGAAGAGGAGGCTGCTTTGTTTGACTTACCAGATCTTTTTAATGATGGCAACAATGGCCTTTGTTCTTATTCTTCTCCTTCTTCCTCTTCTTCTTGGAATTTTTGTGCAGCTGATAGTGGTTTCATCAGGCTTGAAGAGCCATTTCTTTGGGAAAATTATTAG 792 0.4407 MESDAQDSFGSSSSSPSSCSSSSSSSNSDSSGTKRDSTSVVSDENGDSSSNNNNKKKQIKSEEKDKINNNKKNNDDIKHPAYRGVRMRNWGKWVSEIREPKKKSRIWLGTYPTAEMAARAHDVAALAIKGHSAYLNFPHLAPQLPRPATAAPKDIQAAAAKAAAIVFEVATNKKHCDDQVEEAEAEKAKPNRAEPASSCLAQDQSSCSSKEEEAALFDLPDLFNDGNNGLCSYSSPSSSSSWNFCAADSGFIRLEEPFLWENY 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0856 263 SUPERFAMILY DNA-binding domain 81 139 IPR016177 GO:0003677
Mibi11g0856 263 CDD AP2 82 140 IPR001471 GO:0003700|GO:0006355
Mibi11g0856 263 MobiDBLite consensus disorder prediction 1 55 - -
Mibi11g0856 263 Gene3D AP2/ERF domain 81 139 IPR036955 GO:0003700|GO:0006355
Mibi11g0856 263 PRINTS Ethylene responsive element binding protein signature 82 93 IPR001471 GO:0003700|GO:0006355
Mibi11g0856 263 PRINTS Ethylene responsive element binding protein signature 104 120 IPR001471 GO:0003700|GO:0006355
Mibi11g0856 263 MobiDBLite consensus disorder prediction 1 81 - -
Mibi11g0856 263 Pfam AP2 domain 80 131 IPR001471 GO:0003700|GO:0006355
Mibi11g0856 263 MobiDBLite consensus disorder prediction 56 81 - -
Mibi11g0856 263 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 58 226 - -
Mibi11g0856 263 MobiDBLite consensus disorder prediction 184 204 - -
Mibi11g0856 263 ProSiteProfiles AP2/ERF domain profile. 81 138 IPR001471 GO:0003700|GO:0006355
Mibi11g0856 263 FunFam Ethylene-responsive transcription factor 2 80 139 - -
Mibi11g0856 263 SMART rav1_2 81 144 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0856 Mibi-ChrMibi11 22679293 22680084 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0856 71 259 AP2-EREBP Transcription Factor Family AT2G44940 53.881 5.32e-66 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi11g0856 AP2 4.8e-14 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi11g0856 11 22679293 22680084 Mibi11g0856 11 22679293 22680084 ECH