Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0849 ATGGACTTCGAAGGGAACAGCATGTTTTGTGGGAATAATAATAGAGACCAAAACGGTGGTGGAAACAGTAACAACAGTACAAACTTTTCTTGGGATTTATGGGAAACACCTTCTTCTAACAATTCTCTCCTCATCAACAACACTTTCTACTCCTCCTCCGCCGCCGATACGGCGGAGACCACAGCGGCCGTCCCCACCAGCCGCCACGAGGCCAGCCTAGCCAACGCCCTCATGTTCCTCCCCCAAGCTGATCGTGACCACGGCGGCGCCGTCGCCGGCGGCCACCACCACCACCACCACTGTCACTCCGGCGATGGGGCCCACGTGCATGTGGACCCACATCTGATGTGTTTGAAGCTGGGGAAGAGGCACTATTTTGAGGATGCTAATGGTCCTCTTGGCGGCGGCGGCGGCGGAGGGTTTGCGGTGGTGGGGAAGAGGGGGAGAGGGTTCTATGGCGGCGTGAAGGCGGCGGCGGCTGCGGCGGCGGTGGCGAGGTGCCAGGTGGAGGGGTGCCACGTGGCGCTGTTGAATGCTAAGGAGTATCATCGGAGACATAAAGTTTGTGAGATGCATTCCAAGGCACCAAAGGTTATCGTGTTAGGGTTGGAGCAGAGATTTTGTCAACAGTGTAGCAGGTTTCATGTGGTATCGGAGTTCGATGATTCCAAGAGGAGTTGCCGTAGGAGATTGGCTGGCCACAATGAACGAAGAAGAAAGAGCTTCCACGATTCTATCACTAGGAATTCCTCCTCTCAAGAAAATAAGTTACTGGTTGGAGGGTTTCCATACTTATCATCACCTCCACCACCATCATCTGGCTGTGCTCTCTCTCTTCTGTCATCATCTAAGAGTGCCGACCATCCGTGGCTTTCCCCGGCCGATCTCTCGGCGAGATGCAGCGCCGCCCTACGAGAACTTATAGCCGAAAACCGAGCAGCCGCAATGGCTAAACAAATCATTTTGGAAAGAGATTGGCACTACTCACACCATCACCACCAAGAAGATGATGATGATGACCATAATAAGGAGATACAATTTCAATCCAATTACAATTTCTCTCAACAACACCATCAGATGTTTCCCTAG 1089 0.528 MDFEGNSMFCGNNNRDQNGGGNSNNSTNFSWDLWETPSSNNSLLINNTFYSSSAADTAETTAAVPTSRHEASLANALMFLPQADRDHGGAVAGGHHHHHHCHSGDGAHVHVDPHLMCLKLGKRHYFEDANGPLGGGGGGGFAVVGKRGRGFYGGVKAAAAAAAVARCQVEGCHVALLNAKEYHRRHKVCEMHSKAPKVIVLGLEQRFCQQCSRFHVVSEFDDSKRSCRRRLAGHNERRRKSFHDSITRNSSSQENKLLVGGFPYLSSPPPPSSGCALSLLSSSKSADHPWLSPADLSARCSAALRELIAENRAAAMAKQIILERDWHYSHHHHQEDDDDDHNKEIQFQSNYNFSQQHHQMFP 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0849 362 ProSiteProfiles Zinc finger SBP-type profile. 164 241 IPR004333 GO:0003677
Mibi11g0849 362 MobiDBLite consensus disorder prediction 1 24 - -
Mibi11g0849 362 Pfam SBP domain 167 240 IPR004333 GO:0003677
Mibi11g0849 362 Gene3D - 158 228 IPR036893 GO:0003677|GO:0005634
Mibi11g0849 362 FunFam Squamosa promoter-binding-like protein 14 158 228 - -
Mibi11g0849 362 MobiDBLite consensus disorder prediction 7 24 - -
Mibi11g0849 362 MobiDBLite consensus disorder prediction 232 253 - -
Mibi11g0849 362 SUPERFAMILY SBT domain 165 246 IPR036893 GO:0003677|GO:0005634
Mibi11g0849 362 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 80 241 IPR044817 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0849 Mibi-ChrMibi11 22430543 22433571 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0849 116 240 SBP-box Gene Family AT1G27370 51.145 1.04e-36 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Mibi11g0849 SBP 1.5e-31 No_clan