Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0847 ATGTTGGATTATGAATGGGGAAATCCCTCCACTATAATGCTCGCCGGAAACAACGAAGCTCAAGCTTCCGCCACCGACAACGCCGCCGACAACTCCGATCAAACTCACCGTCAAATCTTCGACCACTACAATTCTCACCCCTTCTTACCCGACCACCTTATTCCTAATCCTCCACTGGGTCCCACCACCACGACCACCACCACCTCTGATTTCTCTCTTTTCTACCACCACCACAACCATCAACAACAATTTCACTCCCAACAACAACAACAACAACAACAACAACATTCTCTCTATGCGTCGTCTTTTTTGCCTGTGGGGGAGCCTCCACATTCTATGTTTTCGCTTGACCAGTTTCCACAGGTCAACGCGGGGAACTGTGGGCCTGGTGGTGGGCTTCTGGCGGTGGCGAAGTCGGAGGAGATGGGCCGGCCCATGGACTTCACGGCGTCTCCAATTGGGCTCAACCTCGGTGGCCGGACTTACTTCTCCAGCTCCGAGGACGATTTCGTGAACCGGCTTTACCGCCGGTCTAGACCGTTTGAACCGGGATCGACGGTGTCGTTTAATAGCAACTCTCCTAGGTGCCAGGCGGAGGGGTGTAATGCTGATCTGTCACATGCGAAGCACTATCATCGTCGGCATAAGGTTTGCGAGTATCACTCTAAAGCTGCCACCGTGATCGCCGCTGGGCTGACTCAGCGATTTTGCCAGCAATGTAGCAGGTTTCATATTCTTGCGGAGTTTGATAACGGAAAACGAAGCTGCAGGAAAAGATTGGCAGATCATAATCGTCGTCGAAGAAAAACTCAACAACAACCTTACCAAGAAACCCAAAAATCATCTCACCTCGCAAAGCCTCGCAATTCTACTCTAGACATTGCAGCAAGATCCTCGCCGGATTCCGGAATCCAGTCATCATCGTCGGTGACGGTGGCGGTGTCCCCGCCGGATTATTTCCAGCAAAAGCCATCATATCATCAAAACACAACAACATCATCAAGGACACTGTTTTTCTCAAGTGGGTAG 1029 0.5112 MLDYEWGNPSTIMLAGNNEAQASATDNAADNSDQTHRQIFDHYNSHPFLPDHLIPNPPLGPTTTTTTTSDFSLFYHHHNHQQQFHSQQQQQQQQQHSLYASSFLPVGEPPHSMFSLDQFPQVNAGNCGPGGGLLAVAKSEEMGRPMDFTASPIGLNLGGRTYFSSSEDDFVNRLYRRSRPFEPGSTVSFNSNSPRCQAEGCNADLSHAKHYHRRHKVCEYHSKAATVIAAGLTQRFCQQCSRFHILAEFDNGKRSCRKRLADHNRRRRKTQQQPYQETQKSSHLAKPRNSTLDIAARSSPDSGIQSSSSVTVAVSPPDYFQQKPSYHQNTTTSSRTLFFSSG 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0847 342 ProSiteProfiles Zinc finger SBP-type profile. 193 270 IPR004333 GO:0003677
Mibi11g0847 342 Coils Coil 253 273 - -
Mibi11g0847 342 MobiDBLite consensus disorder prediction 274 289 - -
Mibi11g0847 342 MobiDBLite consensus disorder prediction 262 289 - -
Mibi11g0847 342 MobiDBLite consensus disorder prediction 319 342 - -
Mibi11g0847 342 FunFam Squamosa promoter-binding-like protein 14 187 257 - -
Mibi11g0847 342 Pfam SBP domain 196 269 IPR004333 GO:0003677
Mibi11g0847 342 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 180 320 IPR044817 GO:0003677
Mibi11g0847 342 SUPERFAMILY SBT domain 194 274 IPR036893 GO:0003677|GO:0005634
Mibi11g0847 342 Gene3D - 187 257 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0847 Mibi-ChrMibi11 22337407 22339290 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0847 1 243 SBP-box Gene Family AT1G02065 45.560 1.53e-57 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Mibi11g0847 SBP 1.1e-30 No_clan