Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0842 ATGAGCCAGTGTGTTCCTAGTTGGGATTTGGATGAAAATCCCACAGCCCCAAAAGTTCCTCCTCTTCGTTCAAATTCCATTTCCACTGCACAAGATGTTCCCATGTTAGGTTACGAAGTTGCCGAACTGACATGGGAAAATGGACAATTGTCCATGCATGGTTTGGGTTTGCCAAGAGTACCAGAGAAACCGTTCTCCGCCATGAGGACAACAACAGCACCGTCCTCAAAGTACACATGGGACAAACCTCGCGGAAATGGAACTTTAGAGTCCATAGTCAACCAAGCCACTCATTTTCCCCACCGGAATAAATCGGTATTTGACGCTGGCGCCACCGGCAACGACGGAGACGATTTAGTGCCGTGGTTCGATCCCCAGAGGGCGGCAAAAGCCGCCGTAGTGGCCACCGCCACGCCGGCAACGTCAAACACGATGACAATGGATGGCATGGTTCCTTGTTCAAATCATACAGATGGGCAACAAAGCACACATGTTATGGACTCAGTGCCCTGTGGTGGCACACATGGTAGGAGCATGTTGGGGTATTCCGCACGTGTGGGGTCTTGTAGTGGGCCCACCAATAAAGAGGAAGTGGCACTGTTGCCATCGAAAAATGCGAAGGTGGCACGTGTGCCAATCGCTACCAATTTGAGTAACAAAGATATAAGTGTGAGTGGAAATGTCACGTGCGGAAGAGAATTGCAACGTGAGATGTTAGACACGTGCGAAAAGGAATTGAGAATGAGTAGTCTCATTTCCACGTCGATTGTTTCGCCAGGAAACACTAGCTCCGGCAAGCAGTGTACCAAAACAACCGCTGCAGACGACTATGATTCTATTAGTCATAGCATACCACAGAAAGAGACAGGTGATGAGGAGGACGAAAAGAAAGGTACAGGAAAATCCTCAGTGTCCACTAAAAGGAGTAGGGCTGCTGACATACACAACCAATCCGAAAGGAAAAGGAGAGATAAGATAAACCAGAGGATGAAGGCGTTGCAAAAGCTGGTCCCAAATTCCAGCAAGACAGATAAAGCTTCAATGCTAGATGAAGTAATAGATTATCTAAAGCAGTTACAATCACAAGTGAATATGATGAGTAAAATGAATATGTCAGCCATGATGCTACCAATGGCCATGCAGCAACAGCTTCAAATGTCTATGATGCCTCACATGGGCATGGGCATGGGATTGGGATTGGGAATGGGAATTGACATGAATACCCTTGGCCGTCATGCTAATAACATTTCCAGCATCCCACCGATGTTCCATCCTCCGGCATTCATACCTTTGGCTTCATGGGATGCCTTACTTGGTACTGATCGTCTACAAGGAACTTCATCAACTATGGTGATGCCAGACCCGTTATCCACATTTTTTGGAGGGCAATCACAGCCTGTGTCCATGGATGCATACAATAGGATGGTTGCCATGTATCATCAGCTATACCAACAAGCTTCTAATTCCAAGAGTTGA 1476 0.4702 MSQCVPSWDLDENPTAPKVPPLRSNSISTAQDVPMLGYEVAELTWENGQLSMHGLGLPRVPEKPFSAMRTTTAPSSKYTWDKPRGNGTLESIVNQATHFPHRNKSVFDAGATGNDGDDLVPWFDPQRAAKAAVVATATPATSNTMTMDGMVPCSNHTDGQQSTHVMDSVPCGGTHGRSMLGYSARVGSCSGPTNKEEVALLPSKNAKVARVPIATNLSNKDISVSGNVTCGRELQREMLDTCEKELRMSSLISTSIVSPGNTSSGKQCTKTTAADDYDSISHSIPQKETGDEEDEKKGTGKSSVSTKRSRAADIHNQSERKRRDKINQRMKALQKLVPNSSKTDKASMLDEVIDYLKQLQSQVNMMSKMNMSAMMLPMAMQQQLQMSMMPHMGMGMGLGLGMGIDMNTLGRHANNISSIPPMFHPPAFIPLASWDALLGTDRLQGTSSTMVMPDPLSTFFGGQSQPVSMDAYNRMVAMYHQLYQQASNSKS 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0842 491 MobiDBLite consensus disorder prediction 253 279 - -
Mibi11g0842 491 Gene3D - 305 371 IPR036638 GO:0046983
Mibi11g0842 491 Coils Coil 316 336 - -
Mibi11g0842 491 FunFam transcription factor UNE10 isoform X1 305 370 - -
Mibi11g0842 491 MobiDBLite consensus disorder prediction 253 326 - -
Mibi11g0842 491 Pfam Helix-loop-helix DNA-binding domain 315 360 IPR011598 GO:0046983
Mibi11g0842 491 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 310 359 IPR011598 GO:0046983
Mibi11g0842 491 MobiDBLite consensus disorder prediction 312 326 - -
Mibi11g0842 491 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 314 382 IPR036638 GO:0046983
Mibi11g0842 491 CDD bHLH_AtPIF_like 310 371 - -
Mibi11g0842 491 PANTHER TRANSCRIPTION FACTOR PIF3 7 124 IPR044273 GO:0003700|GO:0006355
Mibi11g0842 491 SMART finulus 316 365 IPR011598 GO:0046983
Mibi11g0842 491 MobiDBLite consensus disorder prediction 281 302 - -
Mibi11g0842 491 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0842 Mibi-ChrMibi11 22072227 22081525 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0842 1 476 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00050 43.299 1.80e-83 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi11g0842 HLH 1.3e-13 No_clan