Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0805 ATGGAAGGAGAGAGAGGCGTTCCAAATAATTATGAACTTCAGGTTTCATTCACAAACCCTCATCATCATCATCAAGCCATCCACGAAATGGGTTTTGTTCAATTCGAAGAGAATCAAGTCCTTAGCTTCTTGGCTCCTTCTGCTCAGTCTCAATCTTCTTCCTGTGGCGGCGCCGCCCCATCCGCAGCGCCGGCCACCAACGGAGGAGGAGGAGGAGGAGCCGCCGGCACGGTCGCAACCTCGGTCGGGTTTAGCCATAATGACCTTGTTACCACTAGAACTCCATGGAACAACGACCAGGTGGGAACTCTAGATCCCAAGGCTGTCAATGATGAAAATTGCACTGGGAATGCTAGTGACGGCAATAATTCATGGTGGAGGAACACAGCATCAGAGAAAAGCAAAGTGAAGGTGAGGAGGAAGCTGAGAGAGCCAAGGTTTTGTTTCCAAACACGAAGCGATGTGGATGTTCTTGATGATGGCTACAAATGGAGGAAATATGGCCAGAAAGTTGTCAAAAATAGCCTTCATCCAAGAAGCTACTACCGTTGCACCCATAGCAATTGCAGAGTGAAGAAGAGGGTTGAACGATTATCAGAAGATTGTCGTATGGTGATAACCACATATGAAGGAAGGCACAATCACTCTCCTTGCGATGACTCAAATTCATCAGAACATGAATGCTTCACCTCTTTCTAA 699 0.4721 MEGERGVPNNYELQVSFTNPHHHHQAIHEMGFVQFEENQVLSFLAPSAQSQSSSCGGAAPSAAPATNGGGGGGAAGTVATSVGFSHNDLVTTRTPWNNDQVGTLDPKAVNDENCTGNASDGNNSWWRNTASEKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHECFTSF 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0805 232 FunFam WRKY transcription factor 57 144 218 - -
Mibi11g0805 232 SMART WRKY_cls 158 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi11g0805 232 Gene3D WRKY domain 145 211 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi11g0805 232 Pfam WRKY DNA -binding domain 159 215 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi11g0805 232 ProSiteProfiles WRKY domain profile. 153 215 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi11g0805 232 SUPERFAMILY WRKY DNA-binding domain 150 216 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi11g0805 232 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 31 219 IPR044810 GO:0003700
Mibi11g0805 232 MobiDBLite consensus disorder prediction 49 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0805 Mibi-ChrMibi11 20486292 20493674 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0805 3 232 WRKY Transcription Factor Family AT2G44745 55.000 3.64e-69 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mibi11g0805 WRKY 1.5e-24 CL0274