Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0803 ATGACAATAATCATTATTTCTATCACTCTTCTGCTTTCTTTCCTCTCTCATTTTATCATCCTCACGACTTCACAGCAAGACTTCATATACCATTTGTGTTACAATAATGTCGGTAATTACACAAACACAAGTTCCTATGACACAAATCTAAGCACCCTTCTTTCCAATCTCACTTCCGACCAAAAAGTTGACTATGGCTATTACACTTCCTCTGAAGGCCAAAACCCAAGTGATAGAGTAAATGCTCTTGGACTATGTAGAGGAGATGTTAAGCCAGATTCTTGTCGTGGTTGCCTAAACAATGCCACGATCCTTCTACGAAAGCTATGTCCAAATCAGAAGGAAGCGTACGGGTACAACGACGGCTGCATTTTACGATACGCTAATCGATCCATGGCTGGGATAAACCAAGAGCCAGATTTTTCAATCTACATGTGTAACAAAAATAATGCTACAGATAATAATTACAATGAAGTGCTTGATGGTCTTATGAGAAGGTTGAGAAGCAAAGCCGCTGCCGGTGATGGTCGCCGGAAGTTCGCGGCGGGGACGGCCACGGCTTTGTTTCAAACTATATATGGTCTTGCTCAGTGCATGCCTGATTTGTCTGAGCAAGATTGTGATGACTGCTTGGAAAAGTCAATTTCGAGTATTCCCTCTCTTTGTAAGAACAGGATTGGTGGGAGGATTATCAAACTGAGTTGCAATATTAGATATGAGAATTATCGCTTCTATGATATTGAAGTTGTTGATTCATTATCTTCATCCCCTCCTACTGCTTCACCATCATCCAACACATCTTCCTCACAAGGAACTGCTGGCTCATCAAAAGGTACGTCTTCCAGAGAAGGGAATCGTAACAAATCAAAAACAGTAATAATCGTAGCGGTGTCTATTGGAGCTTTTATCGCAATCCTTGTTCTTGTGGGCATCTATTTTATGGTTCGAAAATCGAAGAAAACCATTGAAATTGATCAACCGGAGGCAGAGGATGAAGATGAAATTAAACCAATCGAGTCACTGCAATTCAATTTTAACACCATAAGACTAGCTACAGATAACTTCTCTATTGCAAATAAGCTTGGGCAAGGAGGGTTTGGATCAGTATATAAGGGTAGGCTTCCAAATGGTGAAGACATTGCTGTCAAAAGGTTGTCCATGGATTCTGGGCAAGGAGATTCAGAATTTAAAAATGAAGTGCTCTTGGTGGCTAAACTCCAACATCGCAATTTAGTGAGATTACTTGGCTTCTCCTTAGAAAAAAAAGAAAGGCTTTTGGTCTATGAGTTTCTTCCCAACAGAAGTCTGGATTACTTATTGTTCGATTCAAGTGAACGCGTTCATTTGAACTGGGTAATGCGCTATAAAATCATTGGAGGCATTGCTCGTGGCCTTCTTTATCTTCATGAAGATTCAAGATTGCGTATTATTCATCGTGATCTCAAAGCAAGTAATATCCTTTTAGATGAAGAGTTAAATCCTAAAATATCAGATTTCGGTATGGCAAGGCTATTTGTTGTAGACCAAACTCAAAGCAATACAAGCAGAATTGTTGGAACTTATGGATATATGCCACCGGAATATGCAATGCATGGACAATTCTCTGTAAAATCAGATGTTTTCAGTTTTGGCGTATTGGTTCTAGAGATTTTAAGTGGCAAAAAGAACAACAGTGTCTTTGACCAAGAGAATGCCCATGATCTATTAAGCTTTGCATGGAAAAATTGGAGGGAAGGGACGGCTTTCAATTTAGTAGATCCTATATTAAACAATAATGGTTCAAAAAATGAAATAATAAGATGCATCCACATTGGACTATTATGTGTCCAAGAAAATGTAGCTGACAGGCCAACCATGGCTCAAGTTGTACTGATGCTCAATAGCTACTCTTCCTCTCTCCCATTACCATCAAGGCCTCCTCTTTTGGTGAATACCAGTGGTTCTTCTGAGACACATTTGAGGGAGTCCAACTCATCAGAGGCAACAAGATCAAGTGAACGGAAAAGCAACTCTATTCAAGAATCAGTAAATGAGGCCTCAATTACTGAGCTATACCCACGTTAA 2064 0.3968 MTIIIISITLLLSFLSHFIILTTSQQDFIYHLCYNNVGNYTNTSSYDTNLSTLLSNLTSDQKVDYGYYTSSEGQNPSDRVNALGLCRGDVKPDSCRGCLNNATILLRKLCPNQKEAYGYNDGCILRYANRSMAGINQEPDFSIYMCNKNNATDNNYNEVLDGLMRRLRSKAAAGDGRRKFAAGTATALFQTIYGLAQCMPDLSEQDCDDCLEKSISSIPSLCKNRIGGRIIKLSCNIRYENYRFYDIEVVDSLSSSPPTASPSSNTSSSQGTAGSSKGTSSREGNRNKSKTVIIVAVSIGAFIAILVLVGIYFMVRKSKKTIEIDQPEAEDEDEIKPIESLQFNFNTIRLATDNFSIANKLGQGGFGSVYKGRLPNGEDIAVKRLSMDSGQGDSEFKNEVLLVAKLQHRNLVRLLGFSLEKKERLLVYEFLPNRSLDYLLFDSSERVHLNWVMRYKIIGGIARGLLYLHEDSRLRIIHRDLKASNILLDEELNPKISDFGMARLFVVDQTQSNTSRIVGTYGYMPPEYAMHGQFSVKSDVFSFGVLVLEILSGKKNNSVFDQENAHDLLSFAWKNWREGTAFNLVDPILNNNGSKNEIIRCIHIGLLCVQENVADRPTMAQVVLMLNSYSSSLPLPSRPPLLVNTSGSSETHLRESNSSEATRSSERKSNSIQESVNEASITELYPR 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0803 687 Pfam Protein tyrosine and serine/threonine kinase 357 624 IPR001245 GO:0004672|GO:0006468
Mibi11g0803 687 ProSiteProfiles Gnk2-homologous domain profile. 138 244 IPR002902 -
Mibi11g0803 687 FunFam Cysteine-rich receptor-like protein kinase 10 316 430 - -
Mibi11g0803 687 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 31 686 - -
Mibi11g0803 687 ProSiteProfiles Protein kinase domain profile. 355 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g0803 687 Pfam Salt stress response/antifungal 33 129 IPR002902 -
Mibi11g0803 687 Pfam Salt stress response/antifungal 146 242 IPR002902 -
Mibi11g0803 687 ProSiteProfiles Gnk2-homologous domain profile. 28 132 IPR002902 -
Mibi11g0803 687 Gene3D - 139 244 IPR038408 -
Mibi11g0803 687 Gene3D - 25 131 IPR038408 -
Mibi11g0803 687 ProSitePatterns Protein kinases ATP-binding region signature. 361 383 IPR017441 GO:0005524
Mibi11g0803 687 SUPERFAMILY Protein kinase-like (PK-like) 340 653 IPR011009 -
Mibi11g0803 687 MobiDBLite consensus disorder prediction 663 680 - -
Mibi11g0803 687 MobiDBLite consensus disorder prediction 640 655 - -
Mibi11g0803 687 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 26 132 - -
Mibi11g0803 687 FunFam Cysteine-rich receptor-like protein kinase 10 141 244 - -
Mibi11g0803 687 ProSitePatterns Serine/Threonine protein kinases active-site signature. 476 488 IPR008271 GO:0004672|GO:0006468
Mibi11g0803 687 MobiDBLite consensus disorder prediction 640 687 - -
Mibi11g0803 687 CDD STKc_IRAK 361 627 - -
Mibi11g0803 687 MobiDBLite consensus disorder prediction 255 285 - -
Mibi11g0803 687 FunFam cysteine-rich receptor-like protein kinase 10 431 633 - -
Mibi11g0803 687 Gene3D Phosphorylase Kinase; domain 1 316 430 - -
Mibi11g0803 687 Gene3D Transferase(Phosphotransferase) domain 1 431 634 - -
Mibi11g0803 687 SMART serkin_6 355 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0803 Mibi-ChrMibi11 20236704 20243662 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0803 38 687 Receptor kinase-like Gene Family AT4G21410 49.168 0.0 605
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi11g0803 PK_Tyr_Ser-Thr 2.1e-44 CL0016