Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mibi11g0792 | ATGTCCACATCTAAACGATGGTTCAATAGTCATTGTCCTCATCCTTCCGTTAATAAAAATGATGGGATCACCATATTTCCTTTAGCAATTGATGTTACCACTATACTTGCTATGGATAGTAATTTTGAGGATGCAATGGAAAGAATTTTTCAGGAGTCCTTGAATAGCATTAAAATGATCCCTGCCTTTGAAGAAGCCATCCAATCGCTCGACACAACCAACAACCTTCAAGAGCTTAATATTAGTGACCAGTGCTGCGTTTATCTTGAAGATTTTGGTGATGATGCTGAGATCTCAACAATGCCATGTGATCATAATTTTCATAAAATTTGCATTGTAAAGTGGCTCAAAACAAGTCATGTATGTCCCATATGTCGGTATGAAATGCCTGTGGACACAAATTCTTAG | 408 | 0.3725 | MSTSKRWFNSHCPHPSVNKNDGITIFPLAIDVTTILAMDSNFEDAMERIFQESLNSIKMIPAFEEAIQSLDTTNNLQELNISDQCCVYLEDFGDDAEISTMPCDHNFHKICIVKWLKTSHVCPICRYEMPVDTNS | 135 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mibi11g0792 | 135 | ProSiteProfiles | Zinc finger RING-type profile. | 85 | 126 | IPR001841 | - | |
| Mibi11g0792 | 135 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 44 | 132 | IPR013083 | - | |
| Mibi11g0792 | 135 | SUPERFAMILY | RING/U-box | 66 | 132 | - | - | |
| Mibi11g0792 | 135 | SMART | ring_2 | 85 | 125 | IPR001841 | - | |
| Mibi11g0792 | 135 | Pfam | Ring finger domain | 83 | 126 | IPR001841 | - | |
| Mibi11g0792 | 135 | PANTHER | TARGET OF ERK KINASE MPK-1 | 71 | 130 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mibi11g0792 | Mibi-ChrMibi11 | 19741412 | 19741819 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mibi11g0792 | 43 | 130 | C3H Transcription Factor Family | AT1G18760 | 31.818 | 3.06e-14 | 65.1 |