Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0783 ATGGCTTCTTCTCCTCCTTCTCCTTCCCCTCCTCCTCCTCCTCCTCTTGATTCCCCCACAACCACCCCTCCCACAGATCCCCCCACCGCCGTCCCCCTCGCCGTCGCTATCCCCCCGCCTCCTCCTCCGCCGCCGTCTTCTCAGCCGCAGCAACCTCCCCCTCCCTCTTCCTCCTCCTCTCGCCGCCTCCCTCCGCCGTGCTGGTCTCCTGAGGAGACGGTGGCTCTGATCGACGCGTACCGTGACAAGTGGTATTCTCTCGGTAGGGGAAATCTGAAGGCGACTCATTGGCAGGACGTTGCCGATGCCGTTACGTCTCGCTGCCCAGGCGCTTCGCCGCCGAAGACGGCGGTCCAGTGCCGTCATAAGATGGAGAAATTGAGGAAGCGGTACCGTACGGAGATCCAGCGAGCGAGGAATTTGCCTGTCGCTAGGTTTAATTCCTCTTGGGTCCATTTTAAGCGGATGGATGCCATGGAGAAAGGCCCCTCCTCGGTTAAGCCGGAGAACGATTCCGACGATAGCCCCGACGATCTCGACGGCGGCGGCGACGGCGACGACGACGATAATGAGCTGTACGAGGAATTCAGGAGCGGCGGTGGCCGTAGCGGCGGCGGTGGTGGAGGAAGCGCCTCCCAATTGAGGAGCTTGAATAGGTTGTATCGGAACGGGATGGGTGCCGGCGTTGGCGGCGGCGGCGGCAACGGCAATGGCGGCGGGTTTCGGATTCGGATTCCGAATGGGGTGAGCATTGCGCAGCCTGGGAATTCGAAATTGTATGGGAAAATGCCTGATCAGAAGTTTCATTATAATAGCAATAGTAATAGCAACAGCAACATCAACCCAAGTTTGAAATTTGGGCATGGGTTTAATGGGCCCCAAAGTTATGAAGCTAGGGTTTTGAAGGAGAGGAGTGGGTTGGGGAAGAGGGAAAGAGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGATCCTGTGAATGAGATGGTTTGTGCAATTAAGGTTTTGGGAGATGGGTTTGTGAGGATGGAGCAGATGAAGATGGAGATGGCAAGGGAGATTGAGAGTATGAGAATGGACATGGAGATGAAGAGGACTGAGATGATTCTGGAATCACAGCAAAGGATTGTGGAGGCTTTTGCAAAGGCAGTTTCAGAGAAGAAGGCTAAGAGAATGGCTTCATCACCTTCAGAATCTTAG 1197 0.5606 MASSPPSPSPPPPPPLDSPTTTPPTDPPTAVPLAVAIPPPPPPPPSSQPQQPPPPSSSSSRRLPPPCWSPEETVALIDAYRDKWYSLGRGNLKATHWQDVADAVTSRCPGASPPKTAVQCRHKMEKLRKRYRTEIQRARNLPVARFNSSWVHFKRMDAMEKGPSSVKPENDSDDSPDDLDGGGDGDDDDNELYEEFRSGGGRSGGGGGGSASQLRSLNRLYRNGMGAGVGGGGGNGNGGGFRIRIPNGVSIAQPGNSKLYGKMPDQKFHYNSNSNSNSNINPSLKFGHGFNGPQSYEARVLKERSGLGKRERERERERERERDPVNEMVCAIKVLGDGFVRMEQMKMEMAREIESMRMDMEMKRTEMILESQQRIVEAFAKAVSEKKAKRMASSPSES 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0783 398 MobiDBLite consensus disorder prediction 1 61 - -
Mibi11g0783 398 SMART 118neu2 75 164 IPR006578 -
Mibi11g0783 398 Coils Coil 121 141 - -
Mibi11g0783 398 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 45 385 IPR044823 -
Mibi11g0783 398 MobiDBLite consensus disorder prediction 173 193 - -
Mibi11g0783 398 MobiDBLite consensus disorder prediction 1 69 - -
Mibi11g0783 398 MobiDBLite consensus disorder prediction 159 213 - -
Mibi11g0783 398 FunFam Trihelix transcription factor ASIL2 68 133 - -
Mibi11g0783 398 ProSiteProfiles Myb-like domain profile. 68 128 IPR001005 -
Mibi11g0783 398 MobiDBLite consensus disorder prediction 303 323 - -
Mibi11g0783 398 Pfam Myb/SANT-like DNA-binding domain 66 159 IPR044822 -
Mibi11g0783 398 Gene3D - 68 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0783 Mibi-ChrMibi11 19529367 19530563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0783 18 159 Trihelix Transcription Factor Family AT3G14180 32.394 3.75e-18 84.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mibi11g0783 Myb_DNA-bind_4 1.1e-20 CL0123