Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0782 ATGTCTTCTTCTGCGAGTTGGATTACTTCCTTATCTTGTACTTCCCCTGTAAAACAAACCCAAGATTCTTCCTTTCTTCCATCTTTAATTCAATGGCTCGAATTTGTCTTCCTATCTCCATGTCCTCAGAGAGCTCTTTTGGCCGCCATTGATGTTTTACTCATCATCGTACTCTTCGTTCTTCCCGTTAAAAAACTCTTCTCAAGATTCACCTCTAATGGCGGTGGTAGCAGAGCTGAAGCATCTGAACTTGACAAGCCACTTATCCGGCAGAACAGAGATCCCATCAGAACGACAACGTGGTTTAAGCTAAATCTTGTTGTGACGGTTGTTTTGACAATATTGTACACTGTTTCGAGTGGTGTTGGATTTGTCAGAAACAACCAGGTTGATGATGGATTTTTTTGGTTAATTCAAGGAGGTACTCATTTGATTCTTGCAGTCTTAATCATTCATGAGAAAAAATTTCAAGCTGTTTCCCACCCTCTTCCACTTCGATTCTTCTGGATTCTAAACTTTGTTATGAATTGTTTGTTTGTGGTTTCTGGGGTTGTACGTTTCGTTTCTGAGGAAGAAACTAAAGAAGATGGCTTTGACTTTAGGAATGATGATATTGTCTCTTTTATTTCCTTCCCTCTTTCTCTTTTCCTCTTCCTTGCTGCTATTAAAGGATCTACTGGTATCAGCTTCACGCAAGAAACTGAATCTTTAATTGTTGATGGGGAAACTGATGTTAAACCAAACGTGGCTGGTTTTGCCTCTGCTTCTTTAGTATCTAAAGCTTTTTGGCTATGGATAAACCCATTATTGAGTAAAGGTTATAAATCGCCTTTGAAGATTGATGAAGTGCCAACGCTTTCACCAGAACATAGAGCTGAAAGAATGTCAGCATTGTTTGAACAGAAATGGCCTAAGCCACAAGAAAGTTCAAATCATCCTGTTCTAACTACTTTGCTTAGATGCTTCTGGAAGGAAGTTGCATTCACTGCTTTCCTTGCTGTTGTCAGACTTAGTGTTATGTTCATAGGTCCAGTTCTTCTCCAAAGCTTTGTTGATTACACATCTGGTAAGAGAAGTTCTGTTTATGAAGGATACTACCTGGTTTTAATCCTCCTTGTTGCAAAATTCGTAGAAGTTCTGTCCACTCATCATTTCAACTTCAGTTCTCAGAAGCTAGGGATGCTTATCCGATGCTCTCTTATAACCTCGTTGTACAAGAAAGGGCTAAGGTTGTCTTGTTCTGCAAGACAAGATCATGGTATTGGGACTATAGTGAATTATATGGCTGTGGATGCGCAACAACTTTCTGATATGATGCTGCAGCTTCATGCGGTGTGGATGCTGCCCTTTCAAGTTGGGATTGCCTTGCTTCTGCTTTATAAGTACTTAGGGGCAGCGGTAGTTACGACTTTCCTTGGGATTGTGGGTGTTATTGTGTTTGTTATGTTTGGTACTCGAAGGAACAATCGTTTCCAGTTCAATGTGATGAAGAATCGCGATTCTAGGATGAAAGCTGTTAATGAGATGCTGAATTACATGAGGGTGATCAAGTTCCAAGCTTGGGAAGAGCATTTCAATAAGAGGATTATAGGTTTTCGTGGGTCAGAATTCAGCTGGCTTTCCAAGTTTATGTATTCAAATTCTGGGAATACCATTGTGATGTGGAGTTCACCACTCTTGATATCAACACTAACGTTCGGGACAGCGATTTTGCTTGGAGTTCAGCTTGATGCAGGGACAGTTTTCACCGCAACAACTATCTTCAAAATATTGCAGGGACCTATGAGGACTTTCCCACAATCATTGATCTCTCTTTCACAAGCCATGATATCACTTGGGAGGTTGAACAGGTTTATGATGAGTAAGGAATTATCAGATAATTCGGTAGAGAGAGAGGAAGGCTGTGATGGAAAAACTGCTGTAGAGGTGAAAGATGGCACCTTTAGCTGGGACTATGATAATAGCAAGGGGGATTATGACTTGAAAAATATTAATACCAATATCAAGAAGGGTGATCTAACTGCCATTGTTGGCACCGTTGGCTCGGGAAAATCTTCTCTCCTAGCATCAATTCTTGGTGAAATGCACAAAATTTCTGGCAAGGTTCGGGTTTGTGGGAGTACAGCATATGTAGCTCAAACATCATGGATTCAAAACGGGACAATTGAGGATAATATTCTGTATGGATTACCAATGGACAGACACAAGTACAATGAAGTTGTGAGAGTCTGTTCATTGGACAAGGACTTGGAAATGATGGAGGATGGGGATCAGACGGAGATTGGAGAGCGTGGTATCAACCTTAGTGGAGGGCAGAAGCAGAGAATACAACTTGCTCGGGCTGTATATCAAGACTGTGATATCTATCTTCTTGATGATGTCTTTAGCGCCCAGGAATGTGTTAGGGGAGCTCTAAAAGGCAAGACTGTTATTCTTGTAACACACCAAGTAGACTTCTTGCATAATGTTGATCTTATAATGGTGATGAGAGATGGAATGATAGTTCAGTCAGGGAAGTATAATGATCTACTAAATTCTAGTATGGATTTTGGAGATCTAGTAGCAGCACATGAGACTTCTATGGAACTTGTAGAACAAGGCAAAGACATGCCTGGTGAAAATTCCCCCAAACCAGCCAAATGTCCCAGAACTGCAAAGCCAGCTTCTAATTTCAGAGAGACCAATGGTGAAGGCAATTCGCTTGGCCGATCCAAGGCTGGCAAGGAGAACTCTAAACTCATCAAAGACGAAGAGAGGGAAACAGGAAAAGTGAGCCTGCATATTTACAAATTGTATTGTACCGAGGCTTATGGGTGGTGGGGCGTTATAGGTGTAATTATCATTTCTTTATTATGGCAAGGATCTTTAATGGCTGGTGATTATTGGCTGGCATATGAAACCTCAGAAAAGCAAGCTCGAATCTTTAAACCCTCTCTTTTTATCTCTGTATATGCCATTATCGCCGTGGTTTCAGTTGTTTTGGTGATTATAAGATCCTTATCTGTCACCCTCTTGGGGCTTAAGACAGCACAAATTTTCTTCTCTCAGATTCTTAATTGCATCCTGCATGCACCCATGTCTTTCTTTGATACCACACCTTCTGGAAGAATTTTAAGTAGGGCTTCCACTGATCAGACTAATGTTGATGTCTTTCTCCCATTTTTCATGGGTAGTGGGATTGCCATTTACATCACAGTAATTAGCATCTTCATTGTCACATGTCAAAATTCTTGGCCAACAGTTTTCTTGCTGATTCCTCTTGTTTGGTTGAATATATGGTATCGGGGTTATTTCCTTCATTCATCTCGCGAAATTACTCGCCTGGATTCAATAACAAAAGCACCTGTTATTCATCACTTCTCAGAAAGCATTTCAGGGGTCATGACCATCCGTGCATTCAAAAAGCAGAGTGGATTTTGCGAAGAAAATGTTAAACGAGTGAATGAAAATCTGCGCATGGATTTCCACAACAACGGTTTGAATGAGTGGTTGGGTTTTCGCTTAGAATTTCTGGGGAGCTTGGTCTTTTGTATTTCAACCATTTTCATGATTTTATTGCCCAGCAGTATCATAAAGCCAGAAAACGTTGGCTTATCTCTCTCTTATGGGATGTCCTTGAATGTCGCATTATTCTTGGCCATATATGCGAGTTGCTTCATTGAGAACAAAATGGTATCGGTTGAGAGGATTAAGCAGTTCACAAAAATTCCATCTGAAGCAGAATGGCATATTAAAGATTGCCAACCTCCCCTGAATTGGCCTGCCCATGGCAACGTTAATATCAGAGAGTTGCAGGTTAGGTATCGTCCTAACACTCCATTGGTTCTCAAAGGCATCACATTGAGCATTAGCGGGGGTGAAAAGATTGGTGTTGTTGGAAGAACTGGAAGTGGAAAATCTACTTTAATCCAAGTTTTCTTCAGGCTAGTAGAACCTTGTGGAGGAAGAATAATCATCGATGATATCGACATAACTGCATTAGGCCTTCATGACCTAAGGTCTCGATTTGGCATCATTCCCCAGGAGCCTGTTCTTTTTGAGGGCACTGTTAGGAGCAATATTGATCCAACTAAACAACATACAGATGATGAAATATGGAAGAGTTTGGAACGCTGCCAACTAAAAGATGTCGTGGCTTCCAAGCCAGAGAAACTGGACTCATTAGTGGTTGATAATGGAGAGAATTGGAGTGTGGGACAAAGGCAGTTATTGTGTTTGGCTAGGGTTATGCTTAAGCGAAGCCGGCTCTTGTTCTTGGATGAAGCAACAGCTTCTGTGGATTCTCAAACTGATGCTGTGATTCAAAAGATCATCAGAGAGGACTTTGCAGCATGTACCATCATTAGCATTGCTCACAGAATACCAACTGTCATGGACTGTGATAGGGTTCTTGTCATAGATGCAGGACGAGCAAAGGAATTTGATAAACCCAAAAAGTTGCTTCAAAGGACATCATTGTTTGGGGCGTTAGTTCAAGAATATGCCAATCGCTCTTCAGAGCTATAA 4506 0.4101 MSSSASWITSLSCTSPVKQTQDSSFLPSLIQWLEFVFLSPCPQRALLAAIDVLLIIVLFVLPVKKLFSRFTSNGGGSRAEASELDKPLIRQNRDPIRTTTWFKLNLVVTVVLTILYTVSSGVGFVRNNQVDDGFFWLIQGGTHLILAVLIIHEKKFQAVSHPLPLRFFWILNFVMNCLFVVSGVVRFVSEEETKEDGFDFRNDDIVSFISFPLSLFLFLAAIKGSTGISFTQETESLIVDGETDVKPNVAGFASASLVSKAFWLWINPLLSKGYKSPLKIDEVPTLSPEHRAERMSALFEQKWPKPQESSNHPVLTTLLRCFWKEVAFTAFLAVVRLSVMFIGPVLLQSFVDYTSGKRSSVYEGYYLVLILLVAKFVEVLSTHHFNFSSQKLGMLIRCSLITSLYKKGLRLSCSARQDHGIGTIVNYMAVDAQQLSDMMLQLHAVWMLPFQVGIALLLLYKYLGAAVVTTFLGIVGVIVFVMFGTRRNNRFQFNVMKNRDSRMKAVNEMLNYMRVIKFQAWEEHFNKRIIGFRGSEFSWLSKFMYSNSGNTIVMWSSPLLISTLTFGTAILLGVQLDAGTVFTATTIFKILQGPMRTFPQSLISLSQAMISLGRLNRFMMSKELSDNSVEREEGCDGKTAVEVKDGTFSWDYDNSKGDYDLKNINTNIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVRVCGSTAYVAQTSWIQNGTIEDNILYGLPMDRHKYNEVVRVCSLDKDLEMMEDGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAQECVRGALKGKTVILVTHQVDFLHNVDLIMVMRDGMIVQSGKYNDLLNSSMDFGDLVAAHETSMELVEQGKDMPGENSPKPAKCPRTAKPASNFRETNGEGNSLGRSKAGKENSKLIKDEERETGKVSLHIYKLYCTEAYGWWGVIGVIIISLLWQGSLMAGDYWLAYETSEKQARIFKPSLFISVYAIIAVVSVVLVIIRSLSVTLLGLKTAQIFFSQILNCILHAPMSFFDTTPSGRILSRASTDQTNVDVFLPFFMGSGIAIYITVISIFIVTCQNSWPTVFLLIPLVWLNIWYRGYFLHSSREITRLDSITKAPVIHHFSESISGVMTIRAFKKQSGFCEENVKRVNENLRMDFHNNGLNEWLGFRLEFLGSLVFCISTIFMILLPSSIIKPENVGLSLSYGMSLNVALFLAIYASCFIENKMVSVERIKQFTKIPSEAEWHIKDCQPPLNWPAHGNVNIRELQVRYRPNTPLVLKGITLSISGGEKIGVVGRTGSGKSTLIQVFFRLVEPCGGRIIIDDIDITALGLHDLRSRFGIIPQEPVLFEGTVRSNIDPTKQHTDDEIWKSLERCQLKDVVASKPEKLDSLVVDNGENWSVGQRQLLCLARVMLKRSRLLFLDEATASVDSQTDAVIQKIIREDFAACTIISIAHRIPTVMDCDRVLVIDAGRAKEFDKPKKLLQRTSLFGALVQEYANRSSEL 1501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0782 1501 FunFam ABC transporter C family member 5 905 1240 - -
Mibi11g0782 1501 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 640 854 IPR027417 -
Mibi11g0782 1501 CDD ABCC_MRP_domain2 1257 1477 - -
Mibi11g0782 1501 MobiDBLite consensus disorder prediction 888 906 - -
Mibi11g0782 1501 MobiDBLite consensus disorder prediction 867 914 - -
Mibi11g0782 1501 CDD ABC_6TM_ABCC_D2 942 1234 IPR044726 GO:0140359
Mibi11g0782 1501 SUPERFAMILY ABC transporter transmembrane region 939 1239 IPR036640 GO:0005524|GO:0016020
Mibi11g0782 1501 CDD ABCC_MRP_domain1 641 832 - -
Mibi11g0782 1501 FunFam ABC transporter C family member 3 1242 1493 - -
Mibi11g0782 1501 FunFam ABC transporter C family member 10 310 623 - -
Mibi11g0782 1501 Pfam ABC transporter 661 794 IPR003439 GO:0005524
Mibi11g0782 1501 Gene3D - 635 860 IPR027417 -
Mibi11g0782 1501 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 641 856 IPR003439 GO:0005524
Mibi11g0782 1501 FunFam Multidrug resistance-associated protein 1 623 875 - -
Mibi11g0782 1501 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1250 1492 IPR027417 -
Mibi11g0782 1501 SUPERFAMILY ABC transporter transmembrane region 315 619 IPR036640 GO:0005524|GO:0016020
Mibi11g0782 1501 Pfam ABC transporter 1276 1424 IPR003439 GO:0005524
Mibi11g0782 1501 Gene3D ABC transporter type 1, transmembrane domain 299 623 IPR036640 GO:0005524|GO:0016020
Mibi11g0782 1501 Gene3D ABC transporter type 1, transmembrane domain 904 1240 IPR036640 GO:0005524|GO:0016020
Mibi11g0782 1501 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 253 1495 - -
Mibi11g0782 1501 CDD ABC_6TM_ABCC_D1 328 615 IPR044746 GO:0140359
Mibi11g0782 1501 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1261 1493 IPR003439 GO:0005524
Mibi11g0782 1501 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 327 607 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi11g0782 1501 Gene3D - 1242 1492 IPR027417 -
Mibi11g0782 1501 SMART AAA_5 670 841 IPR003593 -
Mibi11g0782 1501 SMART AAA_5 1285 1469 IPR003593 -
Mibi11g0782 1501 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 943 1222 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi11g0782 1501 Pfam ABC transporter transmembrane region 328 595 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi11g0782 1501 Pfam ABC transporter transmembrane region 976 1202 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi11g0782 1501 ProSitePatterns ABC transporters family signature. 768 782 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0782 Mibi-ChrMibi11 19517524 19524088 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0782 633 849 Calmodulin-binding Proteins AT2G36910 30.233 4.31e-22 102