Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0780 ATGTCTTCTTCAGCGAGTTGGATTACTTCCTTCTCTTGTTCTTCCCCTGTAAAACAAACCCAAGATTCTTCCTTTCTTCCATCTTTAGTTCAATGGCTCGAATTTATATTCCTATCTCCATGTCCTCAGAGAGCTCTTTTGGCTGCCATTGATGTTTTGCTTATCCTCGTACTCTTCATTCTTGCCGCCAAAAAGCTCATCTCAAGATTCACCTCTAATGGTGGTGGTAGCCGAGCTGAGATCCCATCAGAACTTGACAAGCCACTTATCCGACAAAGCAGAGATTCCGTCAGAACAACAACGTGGTTTAAGCTAACTCTTGTTGTGACGGTTTTTTTGACAATATTGTACACTGGTTCGAGTGTTGTTGGATTTGTCAGAAACAACCAGGTTGATGATGGATTGTTCTGGTTAGTTCAAGGAGTTACTCATTTGATTCTTGCAGTTTTAATCATTCATGAGAAAAGATTTCAAGCTGTTTCTCACCCTCTTCCACTTCGAGTCTTTTGGATTCTAAACTTTGTTATGAATTGTTTGTTTGTCGTTTCTGGGGTTGTACGTTTGGTTTCTGAGGATGAAACTAAAGATGGCGACTTTGACTTTAGGAATGATGATATTGTCTGTTTTATTTCCTTCCCTCTTTCTCTTTTCCTCTTCCTTGCCGCCATTAAAGGATCTACCGGTATCAGTTTCACGCAGGAAACTGAATCTTTGATTGTTGATGGGGAAACTGATATTAAATCAAACGTAACTTGTTTTGCCTCTGCTTCTTTAGTTTCTAAGGCTTTTTGGCTATGGATAAATCCATTATTGAGTAAAGGTTATAAATCGCCTTTGAAGATTGATGAAGTGCCAACACTTTCACCAGAACATAGAGCTGAAAGAATGTCAGTATTGTTTGAACAGAAATGGCCTAAGCCACAAGAAAGGTCAAATCATCCTGTTCTAATTACTTTGCTTAGATGTTTCTGGAAGGAAGTTGCATTCACTGCTTTCCTTGCTGTTGTTAGACTTAGTGTTATGTTCATAGGTCCAGTTCTTATCCAAAGCTTTGTTGATTACACATCTGGCAAGAGAAGTTCTGTTTATGAAGGATACTACCTGGTTTTAATCCTCCTTGTTGCGAAATTCGTAGAAGTTCTGTCCACTCATCATTTCAACTTCAATTCTCAGAAGCTAGGGATGCTTATACGATGCTCTCTTATTACCTCGTTGTACAAGAAAGGGCTAAGGTTGTCTTGTTCTGCAAGACAAGATCATGGTATTGGGACTATAGTGAATTATATGGCTGTGGATGCGCAACAACTTTCTGATATGATGCTGCAGCTTCATGCTGTGTGGATGATGCCATTTCAAGTTGGGATTGCCTTGGTTCTGCTTTATAAGTACTTGGGCGCTGCGGTGATCACAGCATTCCTTGGGATTGTTGGTGTTATTTTGTTTGTTGTGTTTGGTACTCGAAGGAACAACCGATTCCAGTACAATGTGATGAAGAATCGTGATTCAAGGATGAAGGCTGTTAATGAGATGCTGAATTACATGAGGGTAATCAAGTTCCAAGCTTGGGAAGAGCATTTTAATAAGAGAATTATGGGTTTTCGTGAGTCAGAATTCAGCTGGCTTTCCAAGTTTATGTATTCAATTTCTGGGAATATCATTGTGATGTGGAGCACACCACTATTGATATCAACTCTAACATTCGGGACAGCGATTTTGCTCCGAGTTCGGCTTGATGCAGGGACGGTTTTCACCACAACAACTATCTTCAAAATATTGCAGGAACCTATTAGGACTTTCCCACAATCAATGATCTCTCTTTCACAAGCCATGATATCGCTTGGGAGGTTGGATAGGTTTATGATGAGTAAGGAATTATCAGATAATTCAGTAGAGAGAGAGGAAGGCTGTGATGGACAAACTGCTGTAGAGGTGAAAGATGGCACCTTCAGCTGGGATGATGATGATAGCAAGGGGGACTATGACTTGAAAAATATTAATATCAATATCAAGAAGGGTGATCTCACAGCCATTGTTGGCACCGTTGGCTCGGGAAAATCTTCTCTCCTAGCATCAATTCTTGGTGAAATGCACAAAGTTTCTGGCAAGGTTCGGGTTTGTGGGAGTACAGCTTATGTAGCTCAAACATCATGGATTCAGAATGGGACAATTGAGGATAATATTCTGTATGGATTACCAATGGACAGACACAAGTACAATGAAGTTGTGAGAGTCTGTTCCTTGGACAAGGACTTGGAAATGATGGAGGATGGGGATCAGACGGAGATTGGGGAGCGTGGCATCAACCTTAGTGGAGGGCAGAAGCAGAGAATACAACTTGCTCGGGCTGTTTATCAAGACTGTGATATCTATCTTCTTGATGATGTCTTTAGTGCCGTTGATGCTCATACCGGCTCTGCAATATTCAAGGAATGTGTAAGGGGAGCTCTAAAAGGCAGGACTGTTATTCTTGTAACACACCAAGTAGACTTTCTGCATAATGTTGATCGTATAATGGTGATGAGAGATGGAATGATAGTTCAGTCAGGGAAGTATAATGATCTACTAAATTCTGGTATGGATTTTGGAGATCTGGTAGCAGCACATGAGACTTCTATGGAACTTGTAGAACAAGGCAAAGACATGCCTGGTGAAAATTCCCCCAGACCAGCCAAATCTCCCAGATCTCCAAAGCCAGCTTCTAATTTCAGAGAGACCAATGGTGAAGGCAATTTGCTTGACCAACCCAAGGCTGGCAAGGAGATTTCTAAACTCATCAAAGACGAAGAGAGGGAAACAGGAAAAGTGAGCTTGCATATTTACAAATTGTATTGTACCGAGGCTTATGGGTGGTGGGGCATTACAGGTGTAATTCTCATTTCTTTGTTATGGCAAGGATCTCTAATGGCTGGCGATTATTGGCTGGCATATGAAACCTCAGAAAAGCAAGCTCAAATCTTCAAACCTGCTCTTTTTATCTCCGTATATGCCATTATCGCCGCGGTTTCAGTTGTTTTCGTGATTATAAGATCCTTCTCTGTCACCCTCTTGGGGCTTAAGACAGCACAAATTTTCTTCTCTCAGATTCTTAATTGCATCCTGCATGCACCCATGTCTTTCTTTGATACCACACCTTCTGGAAGAATCTTAAGTAGGGCTTCCACTGATCAGACTAATGTTGATGTCTTTCTCCCATTTTTCGTGGGTATTGTGATTTCCATGTACATCACAGTAATTAGCATCTTCATTGTGACATGTCAAAACTCTTGGCCAACAGTTTTCTTGCTGATTCCTCTTGTTTGGTTGAATATATGGTATCGGGGTTATTTCCTTTCTTCGTCTCGGGAAATTACTCGCCTGGATTCAATAACAAAAGCACCTGTTATTCATCATTTCTCTGAAAGCATTTCAGGGGTCATGACGATTCGTGCATTTAAAAAGCAGAGTGGATTTTGCAAAGAAAATGTTAAACGAGTGAATGAAAATCTGCGCATGGATTTCCACAACAATGGTTCAAATGAGTGGTTGGGTTTTCGCTTAGAATTGCTGGGGAGCTTGGTCTTTTGTATTTCAACCATGTTCATGATTTTATTGCCCAGCAGTATCATAAAGCCAGAAAACGTTGGCTTATCTCTCTCTTATGGGTTGTCCCTGAATGCTGTGTTGTTCTTCGCCATTTACATGAGTTGCTTCATTGAGAACAGAATGGTATCGGTCGAGAGGATTAAGCAGTTCACAAAAATTCCATCTGAAGCAGAATGGCATTTTAAAGATCGCCAACCTCCCCCAAATTGGCCTGCCCATGGCAACGTTAATATCAGAGAGTTGCAGGTTAGGTATCGTCCTAACACTCCTTTAGTTCTCAAAGGCATCACGTTGAGCATTAGTGGGGGAGAAAAGATTGGTGTTGTTGGAAGAACAGGAAGTGGAAAATCTACTTTAATCCAAGTTTTCTTCAGGCTAGTAGAACCTTCTGGAGGAAGAATAATCATCGATGATATCGACATAACTGCATTAGGCCTTCATGACCTACGGTCTCGATTCGGCATCATTCCCCAGGAGCCTGTTCTTTTTGAGGGCACTGTCAGAAGCAATATTGATCCAACTGAACAATATTCAGATGAAGAAATATGGAAGAGTTTGGAGCGCTGCCAACTAAAAGATGCCGTGGCTTCCAAGCCAGAGAAACTGGATGCATTAGTGGTTGATAATGGAGAGAATTGGAGTGTGGGACAGAGGCAGTTATTGTGTTTGGGGAGGGTTATGCTTAAGCGAAGCCGGCTCTTGTTCTTGGATGAAGCAACAGCTTCTGTGGATTCTCAAACTGATGCTGTGATTCAGAAGATCATCAGAGAGGACTTTGCAGCATGTACCATCATTAGCATTGCTCACAGAATACCAACTGTCATGGACTGTGATAGGGTTCTTGTCATAGATGCAGGACGAGCAAAGGAATTTGATAAACCCTCAAAGTTGCTTCAGAGGCCATCATTATTCGGGGCGTTAGTTCAAGAATATGCCAATCGCTCGTCGGAGCTATAA 4539 0.4146 MSSSASWITSFSCSSPVKQTQDSSFLPSLVQWLEFIFLSPCPQRALLAAIDVLLILVLFILAAKKLISRFTSNGGGSRAEIPSELDKPLIRQSRDSVRTTTWFKLTLVVTVFLTILYTGSSVVGFVRNNQVDDGLFWLVQGVTHLILAVLIIHEKRFQAVSHPLPLRVFWILNFVMNCLFVVSGVVRLVSEDETKDGDFDFRNDDIVCFISFPLSLFLFLAAIKGSTGISFTQETESLIVDGETDIKSNVTCFASASLVSKAFWLWINPLLSKGYKSPLKIDEVPTLSPEHRAERMSVLFEQKWPKPQERSNHPVLITLLRCFWKEVAFTAFLAVVRLSVMFIGPVLIQSFVDYTSGKRSSVYEGYYLVLILLVAKFVEVLSTHHFNFNSQKLGMLIRCSLITSLYKKGLRLSCSARQDHGIGTIVNYMAVDAQQLSDMMLQLHAVWMMPFQVGIALVLLYKYLGAAVITAFLGIVGVILFVVFGTRRNNRFQYNVMKNRDSRMKAVNEMLNYMRVIKFQAWEEHFNKRIMGFRESEFSWLSKFMYSISGNIIVMWSTPLLISTLTFGTAILLRVRLDAGTVFTTTTIFKILQEPIRTFPQSMISLSQAMISLGRLDRFMMSKELSDNSVEREEGCDGQTAVEVKDGTFSWDDDDSKGDYDLKNININIKKGDLTAIVGTVGSGKSSLLASILGEMHKVSGKVRVCGSTAYVAQTSWIQNGTIEDNILYGLPMDRHKYNEVVRVCSLDKDLEMMEDGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSAIFKECVRGALKGRTVILVTHQVDFLHNVDRIMVMRDGMIVQSGKYNDLLNSGMDFGDLVAAHETSMELVEQGKDMPGENSPRPAKSPRSPKPASNFRETNGEGNLLDQPKAGKEISKLIKDEERETGKVSLHIYKLYCTEAYGWWGITGVILISLLWQGSLMAGDYWLAYETSEKQAQIFKPALFISVYAIIAAVSVVFVIIRSFSVTLLGLKTAQIFFSQILNCILHAPMSFFDTTPSGRILSRASTDQTNVDVFLPFFVGIVISMYITVISIFIVTCQNSWPTVFLLIPLVWLNIWYRGYFLSSSREITRLDSITKAPVIHHFSESISGVMTIRAFKKQSGFCKENVKRVNENLRMDFHNNGSNEWLGFRLELLGSLVFCISTMFMILLPSSIIKPENVGLSLSYGLSLNAVLFFAIYMSCFIENRMVSVERIKQFTKIPSEAEWHFKDRQPPPNWPAHGNVNIRELQVRYRPNTPLVLKGITLSISGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDDIDITALGLHDLRSRFGIIPQEPVLFEGTVRSNIDPTEQYSDEEIWKSLERCQLKDAVASKPEKLDALVVDNGENWSVGQRQLLCLGRVMLKRSRLLFLDEATASVDSQTDAVIQKIIREDFAACTIISIAHRIPTVMDCDRVLVIDAGRAKEFDKPSKLLQRPSLFGALVQEYANRSSEL 1512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0780 1512 CDD ABC_6TM_ABCC_D2 953 1245 IPR044726 GO:0140359
Mibi11g0780 1512 FunFam ABC transporter C family member 10 311 624 - -
Mibi11g0780 1512 CDD ABC_6TM_ABCC_D1 329 616 IPR044746 GO:0140359
Mibi11g0780 1512 Gene3D - 1253 1502 IPR027417 -
Mibi11g0780 1512 FunFam ABC transporter C family member 5 916 1251 - -
Mibi11g0780 1512 Pfam ABC transporter 662 795 IPR003439 GO:0005524
Mibi11g0780 1512 ProSitePatterns ABC transporters family signature. 769 783 IPR017871 GO:0005524|GO:0016887
Mibi11g0780 1512 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 639 865 IPR027417 -
Mibi11g0780 1512 FunFam ABC transporter C family member 3 1253 1504 - -
Mibi11g0780 1512 Gene3D ABC transporter type 1, transmembrane domain 917 1251 IPR036640 GO:0005524|GO:0016020
Mibi11g0780 1512 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1272 1504 IPR003439 GO:0005524
Mibi11g0780 1512 SUPERFAMILY ABC transporter transmembrane region 310 620 IPR036640 GO:0005524|GO:0016020
Mibi11g0780 1512 MobiDBLite consensus disorder prediction 876 914 - -
Mibi11g0780 1512 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 254 1506 - -
Mibi11g0780 1512 Pfam ABC transporter transmembrane region 329 595 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi11g0780 1512 Pfam ABC transporter transmembrane region 987 1206 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi11g0780 1512 FunFam ABC transporter C family member 4 625 886 - -
Mibi11g0780 1512 Pfam ABC transporter 1287 1435 IPR003439 GO:0005524
Mibi11g0780 1512 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 955 1233 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi11g0780 1512 Gene3D ABC transporter type 1, transmembrane domain 315 616 IPR036640 GO:0005524|GO:0016020
Mibi11g0780 1512 SUPERFAMILY ABC transporter transmembrane region 950 1250 IPR036640 GO:0005524|GO:0016020
Mibi11g0780 1512 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 642 867 IPR003439 GO:0005524
Mibi11g0780 1512 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 328 608 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi11g0780 1512 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1260 1503 IPR027417 -
Mibi11g0780 1512 CDD ABCC_MRP_domain2 1268 1488 - -
Mibi11g0780 1512 SMART AAA_5 1296 1489 IPR003593 -
Mibi11g0780 1512 SMART AAA_5 671 849 IPR003593 -
Mibi11g0780 1512 Gene3D - 617 885 IPR027417 -
Mibi11g0780 1512 CDD ABCC_MRP_domain1 642 843 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0780 Mibi-ChrMibi11 19494794 19501373 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0780 642 860 Calmodulin-binding Proteins AT2G36910 32.203 6.20e-24 108