Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mibi11g0780 | ATGTCTTCTTCAGCGAGTTGGATTACTTCCTTCTCTTGTTCTTCCCCTGTAAAACAAACCCAAGATTCTTCCTTTCTTCCATCTTTAGTTCAATGGCTCGAATTTATATTCCTATCTCCATGTCCTCAGAGAGCTCTTTTGGCTGCCATTGATGTTTTGCTTATCCTCGTACTCTTCATTCTTGCCGCCAAAAAGCTCATCTCAAGATTCACCTCTAATGGTGGTGGTAGCCGAGCTGAGATCCCATCAGAACTTGACAAGCCACTTATCCGACAAAGCAGAGATTCCGTCAGAACAACAACGTGGTTTAAGCTAACTCTTGTTGTGACGGTTTTTTTGACAATATTGTACACTGGTTCGAGTGTTGTTGGATTTGTCAGAAACAACCAGGTTGATGATGGATTGTTCTGGTTAGTTCAAGGAGTTACTCATTTGATTCTTGCAGTTTTAATCATTCATGAGAAAAGATTTCAAGCTGTTTCTCACCCTCTTCCACTTCGAGTCTTTTGGATTCTAAACTTTGTTATGAATTGTTTGTTTGTCGTTTCTGGGGTTGTACGTTTGGTTTCTGAGGATGAAACTAAAGATGGCGACTTTGACTTTAGGAATGATGATATTGTCTGTTTTATTTCCTTCCCTCTTTCTCTTTTCCTCTTCCTTGCCGCCATTAAAGGATCTACCGGTATCAGTTTCACGCAGGAAACTGAATCTTTGATTGTTGATGGGGAAACTGATATTAAATCAAACGTAACTTGTTTTGCCTCTGCTTCTTTAGTTTCTAAGGCTTTTTGGCTATGGATAAATCCATTATTGAGTAAAGGTTATAAATCGCCTTTGAAGATTGATGAAGTGCCAACACTTTCACCAGAACATAGAGCTGAAAGAATGTCAGTATTGTTTGAACAGAAATGGCCTAAGCCACAAGAAAGGTCAAATCATCCTGTTCTAATTACTTTGCTTAGATGTTTCTGGAAGGAAGTTGCATTCACTGCTTTCCTTGCTGTTGTTAGACTTAGTGTTATGTTCATAGGTCCAGTTCTTATCCAAAGCTTTGTTGATTACACATCTGGCAAGAGAAGTTCTGTTTATGAAGGATACTACCTGGTTTTAATCCTCCTTGTTGCGAAATTCGTAGAAGTTCTGTCCACTCATCATTTCAACTTCAATTCTCAGAAGCTAGGGATGCTTATACGATGCTCTCTTATTACCTCGTTGTACAAGAAAGGGCTAAGGTTGTCTTGTTCTGCAAGACAAGATCATGGTATTGGGACTATAGTGAATTATATGGCTGTGGATGCGCAACAACTTTCTGATATGATGCTGCAGCTTCATGCTGTGTGGATGATGCCATTTCAAGTTGGGATTGCCTTGGTTCTGCTTTATAAGTACTTGGGCGCTGCGGTGATCACAGCATTCCTTGGGATTGTTGGTGTTATTTTGTTTGTTGTGTTTGGTACTCGAAGGAACAACCGATTCCAGTACAATGTGATGAAGAATCGTGATTCAAGGATGAAGGCTGTTAATGAGATGCTGAATTACATGAGGGTAATCAAGTTCCAAGCTTGGGAAGAGCATTTTAATAAGAGAATTATGGGTTTTCGTGAGTCAGAATTCAGCTGGCTTTCCAAGTTTATGTATTCAATTTCTGGGAATATCATTGTGATGTGGAGCACACCACTATTGATATCAACTCTAACATTCGGGACAGCGATTTTGCTCCGAGTTCGGCTTGATGCAGGGACGGTTTTCACCACAACAACTATCTTCAAAATATTGCAGGAACCTATTAGGACTTTCCCACAATCAATGATCTCTCTTTCACAAGCCATGATATCGCTTGGGAGGTTGGATAGGTTTATGATGAGTAAGGAATTATCAGATAATTCAGTAGAGAGAGAGGAAGGCTGTGATGGACAAACTGCTGTAGAGGTGAAAGATGGCACCTTCAGCTGGGATGATGATGATAGCAAGGGGGACTATGACTTGAAAAATATTAATATCAATATCAAGAAGGGTGATCTCACAGCCATTGTTGGCACCGTTGGCTCGGGAAAATCTTCTCTCCTAGCATCAATTCTTGGTGAAATGCACAAAGTTTCTGGCAAGGTTCGGGTTTGTGGGAGTACAGCTTATGTAGCTCAAACATCATGGATTCAGAATGGGACAATTGAGGATAATATTCTGTATGGATTACCAATGGACAGACACAAGTACAATGAAGTTGTGAGAGTCTGTTCCTTGGACAAGGACTTGGAAATGATGGAGGATGGGGATCAGACGGAGATTGGGGAGCGTGGCATCAACCTTAGTGGAGGGCAGAAGCAGAGAATACAACTTGCTCGGGCTGTTTATCAAGACTGTGATATCTATCTTCTTGATGATGTCTTTAGTGCCGTTGATGCTCATACCGGCTCTGCAATATTCAAGGAATGTGTAAGGGGAGCTCTAAAAGGCAGGACTGTTATTCTTGTAACACACCAAGTAGACTTTCTGCATAATGTTGATCGTATAATGGTGATGAGAGATGGAATGATAGTTCAGTCAGGGAAGTATAATGATCTACTAAATTCTGGTATGGATTTTGGAGATCTGGTAGCAGCACATGAGACTTCTATGGAACTTGTAGAACAAGGCAAAGACATGCCTGGTGAAAATTCCCCCAGACCAGCCAAATCTCCCAGATCTCCAAAGCCAGCTTCTAATTTCAGAGAGACCAATGGTGAAGGCAATTTGCTTGACCAACCCAAGGCTGGCAAGGAGATTTCTAAACTCATCAAAGACGAAGAGAGGGAAACAGGAAAAGTGAGCTTGCATATTTACAAATTGTATTGTACCGAGGCTTATGGGTGGTGGGGCATTACAGGTGTAATTCTCATTTCTTTGTTATGGCAAGGATCTCTAATGGCTGGCGATTATTGGCTGGCATATGAAACCTCAGAAAAGCAAGCTCAAATCTTCAAACCTGCTCTTTTTATCTCCGTATATGCCATTATCGCCGCGGTTTCAGTTGTTTTCGTGATTATAAGATCCTTCTCTGTCACCCTCTTGGGGCTTAAGACAGCACAAATTTTCTTCTCTCAGATTCTTAATTGCATCCTGCATGCACCCATGTCTTTCTTTGATACCACACCTTCTGGAAGAATCTTAAGTAGGGCTTCCACTGATCAGACTAATGTTGATGTCTTTCTCCCATTTTTCGTGGGTATTGTGATTTCCATGTACATCACAGTAATTAGCATCTTCATTGTGACATGTCAAAACTCTTGGCCAACAGTTTTCTTGCTGATTCCTCTTGTTTGGTTGAATATATGGTATCGGGGTTATTTCCTTTCTTCGTCTCGGGAAATTACTCGCCTGGATTCAATAACAAAAGCACCTGTTATTCATCATTTCTCTGAAAGCATTTCAGGGGTCATGACGATTCGTGCATTTAAAAAGCAGAGTGGATTTTGCAAAGAAAATGTTAAACGAGTGAATGAAAATCTGCGCATGGATTTCCACAACAATGGTTCAAATGAGTGGTTGGGTTTTCGCTTAGAATTGCTGGGGAGCTTGGTCTTTTGTATTTCAACCATGTTCATGATTTTATTGCCCAGCAGTATCATAAAGCCAGAAAACGTTGGCTTATCTCTCTCTTATGGGTTGTCCCTGAATGCTGTGTTGTTCTTCGCCATTTACATGAGTTGCTTCATTGAGAACAGAATGGTATCGGTCGAGAGGATTAAGCAGTTCACAAAAATTCCATCTGAAGCAGAATGGCATTTTAAAGATCGCCAACCTCCCCCAAATTGGCCTGCCCATGGCAACGTTAATATCAGAGAGTTGCAGGTTAGGTATCGTCCTAACACTCCTTTAGTTCTCAAAGGCATCACGTTGAGCATTAGTGGGGGAGAAAAGATTGGTGTTGTTGGAAGAACAGGAAGTGGAAAATCTACTTTAATCCAAGTTTTCTTCAGGCTAGTAGAACCTTCTGGAGGAAGAATAATCATCGATGATATCGACATAACTGCATTAGGCCTTCATGACCTACGGTCTCGATTCGGCATCATTCCCCAGGAGCCTGTTCTTTTTGAGGGCACTGTCAGAAGCAATATTGATCCAACTGAACAATATTCAGATGAAGAAATATGGAAGAGTTTGGAGCGCTGCCAACTAAAAGATGCCGTGGCTTCCAAGCCAGAGAAACTGGATGCATTAGTGGTTGATAATGGAGAGAATTGGAGTGTGGGACAGAGGCAGTTATTGTGTTTGGGGAGGGTTATGCTTAAGCGAAGCCGGCTCTTGTTCTTGGATGAAGCAACAGCTTCTGTGGATTCTCAAACTGATGCTGTGATTCAGAAGATCATCAGAGAGGACTTTGCAGCATGTACCATCATTAGCATTGCTCACAGAATACCAACTGTCATGGACTGTGATAGGGTTCTTGTCATAGATGCAGGACGAGCAAAGGAATTTGATAAACCCTCAAAGTTGCTTCAGAGGCCATCATTATTCGGGGCGTTAGTTCAAGAATATGCCAATCGCTCGTCGGAGCTATAA | 4539 | 0.4146 | MSSSASWITSFSCSSPVKQTQDSSFLPSLVQWLEFIFLSPCPQRALLAAIDVLLILVLFILAAKKLISRFTSNGGGSRAEIPSELDKPLIRQSRDSVRTTTWFKLTLVVTVFLTILYTGSSVVGFVRNNQVDDGLFWLVQGVTHLILAVLIIHEKRFQAVSHPLPLRVFWILNFVMNCLFVVSGVVRLVSEDETKDGDFDFRNDDIVCFISFPLSLFLFLAAIKGSTGISFTQETESLIVDGETDIKSNVTCFASASLVSKAFWLWINPLLSKGYKSPLKIDEVPTLSPEHRAERMSVLFEQKWPKPQERSNHPVLITLLRCFWKEVAFTAFLAVVRLSVMFIGPVLIQSFVDYTSGKRSSVYEGYYLVLILLVAKFVEVLSTHHFNFNSQKLGMLIRCSLITSLYKKGLRLSCSARQDHGIGTIVNYMAVDAQQLSDMMLQLHAVWMMPFQVGIALVLLYKYLGAAVITAFLGIVGVILFVVFGTRRNNRFQYNVMKNRDSRMKAVNEMLNYMRVIKFQAWEEHFNKRIMGFRESEFSWLSKFMYSISGNIIVMWSTPLLISTLTFGTAILLRVRLDAGTVFTTTTIFKILQEPIRTFPQSMISLSQAMISLGRLDRFMMSKELSDNSVEREEGCDGQTAVEVKDGTFSWDDDDSKGDYDLKNININIKKGDLTAIVGTVGSGKSSLLASILGEMHKVSGKVRVCGSTAYVAQTSWIQNGTIEDNILYGLPMDRHKYNEVVRVCSLDKDLEMMEDGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSAIFKECVRGALKGRTVILVTHQVDFLHNVDRIMVMRDGMIVQSGKYNDLLNSGMDFGDLVAAHETSMELVEQGKDMPGENSPRPAKSPRSPKPASNFRETNGEGNLLDQPKAGKEISKLIKDEERETGKVSLHIYKLYCTEAYGWWGITGVILISLLWQGSLMAGDYWLAYETSEKQAQIFKPALFISVYAIIAAVSVVFVIIRSFSVTLLGLKTAQIFFSQILNCILHAPMSFFDTTPSGRILSRASTDQTNVDVFLPFFVGIVISMYITVISIFIVTCQNSWPTVFLLIPLVWLNIWYRGYFLSSSREITRLDSITKAPVIHHFSESISGVMTIRAFKKQSGFCKENVKRVNENLRMDFHNNGSNEWLGFRLELLGSLVFCISTMFMILLPSSIIKPENVGLSLSYGLSLNAVLFFAIYMSCFIENRMVSVERIKQFTKIPSEAEWHFKDRQPPPNWPAHGNVNIRELQVRYRPNTPLVLKGITLSISGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDDIDITALGLHDLRSRFGIIPQEPVLFEGTVRSNIDPTEQYSDEEIWKSLERCQLKDAVASKPEKLDALVVDNGENWSVGQRQLLCLGRVMLKRSRLLFLDEATASVDSQTDAVIQKIIREDFAACTIISIAHRIPTVMDCDRVLVIDAGRAKEFDKPSKLLQRPSLFGALVQEYANRSSEL | 1512 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mibi11g0780 | 1512 | CDD | ABC_6TM_ABCC_D2 | 953 | 1245 | IPR044726 | GO:0140359 | |
Mibi11g0780 | 1512 | FunFam | ABC transporter C family member 10 | 311 | 624 | - | - | |
Mibi11g0780 | 1512 | CDD | ABC_6TM_ABCC_D1 | 329 | 616 | IPR044746 | GO:0140359 | |
Mibi11g0780 | 1512 | Gene3D | - | 1253 | 1502 | IPR027417 | - | |
Mibi11g0780 | 1512 | FunFam | ABC transporter C family member 5 | 916 | 1251 | - | - | |
Mibi11g0780 | 1512 | Pfam | ABC transporter | 662 | 795 | IPR003439 | GO:0005524 | |
Mibi11g0780 | 1512 | ProSitePatterns | ABC transporters family signature. | 769 | 783 | IPR017871 | GO:0005524|GO:0016887 | |
Mibi11g0780 | 1512 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 639 | 865 | IPR027417 | - | |
Mibi11g0780 | 1512 | FunFam | ABC transporter C family member 3 | 1253 | 1504 | - | - | |
Mibi11g0780 | 1512 | Gene3D | ABC transporter type 1, transmembrane domain | 917 | 1251 | IPR036640 | GO:0005524|GO:0016020 | |
Mibi11g0780 | 1512 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 1272 | 1504 | IPR003439 | GO:0005524 | |
Mibi11g0780 | 1512 | SUPERFAMILY | ABC transporter transmembrane region | 310 | 620 | IPR036640 | GO:0005524|GO:0016020 | |
Mibi11g0780 | 1512 | MobiDBLite | consensus disorder prediction | 876 | 914 | - | - | |
Mibi11g0780 | 1512 | PANTHER | ATP-BINDING CASSETTE SUB-FAMILY C | 254 | 1506 | - | - | |
Mibi11g0780 | 1512 | Pfam | ABC transporter transmembrane region | 329 | 595 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Mibi11g0780 | 1512 | Pfam | ABC transporter transmembrane region | 987 | 1206 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Mibi11g0780 | 1512 | FunFam | ABC transporter C family member 4 | 625 | 886 | - | - | |
Mibi11g0780 | 1512 | Pfam | ABC transporter | 1287 | 1435 | IPR003439 | GO:0005524 | |
Mibi11g0780 | 1512 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 955 | 1233 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Mibi11g0780 | 1512 | Gene3D | ABC transporter type 1, transmembrane domain | 315 | 616 | IPR036640 | GO:0005524|GO:0016020 | |
Mibi11g0780 | 1512 | SUPERFAMILY | ABC transporter transmembrane region | 950 | 1250 | IPR036640 | GO:0005524|GO:0016020 | |
Mibi11g0780 | 1512 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 642 | 867 | IPR003439 | GO:0005524 | |
Mibi11g0780 | 1512 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 328 | 608 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Mibi11g0780 | 1512 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1260 | 1503 | IPR027417 | - | |
Mibi11g0780 | 1512 | CDD | ABCC_MRP_domain2 | 1268 | 1488 | - | - | |
Mibi11g0780 | 1512 | SMART | AAA_5 | 1296 | 1489 | IPR003593 | - | |
Mibi11g0780 | 1512 | SMART | AAA_5 | 671 | 849 | IPR003593 | - | |
Mibi11g0780 | 1512 | Gene3D | - | 617 | 885 | IPR027417 | - | |
Mibi11g0780 | 1512 | CDD | ABCC_MRP_domain1 | 642 | 843 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mibi11g0780 | Mibi-ChrMibi11 | 19494794 | 19501373 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mibi11g0780 | 642 | 860 | Calmodulin-binding Proteins | AT2G36910 | 32.203 | 6.20e-24 | 108 |