Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0730 ATGGTAGACGTTAAAAAGGAGGCAGAGGAGTTTTCTTTTGATTCACATGATAAAGGAGATAGGCAACAGTTAGGTTTTTCAACCCCTGTTTCAAGGAAAAGAGTACGAGCTAGACGATCAACAAAGGGATGCTGGTCAGAGGAGGAGGACAGTCGTTTGCTGGAAGCAGTCAAGAAGCACAACGGAAAGAATTGGAAGAAAATAGCTGCATATGTCCCCGGGAAAACTGATGTTCAATGTTTCCATCACTGGCTAAAAGTTGTGAATCCTGAGCTTGTAAAGGGATCATGGACAAAGGAGGAAGATGATTGTATCATTGACCAAGTAGCGAAGTATGGTTGTAAGAGATGGTCTATTATTGCAAAATACTTGCCTGGTCGTATTGGGAAGCAATGCCGTGAGAGGTGGCATAATCACCTAGACCCGGCTATAAAGAAAGATGCATGGACAGAGGAGGAGGAATCCATGCTTGCATTCTATCACGAAATATATGGTAATAAGTGGACACAAATTGCAAGGTTTCTTCCTCGAAGGACTGACAATGCTATTAAAAACCATTGGAACTGTTCAATAAAGAAGTTGGAGGCATCCTCACCTGGATGTGATGTAAATGCTGCTCGTGATTTCATCACTGGTAAAATGAATATGTTGGTTAAAGATGAAGATCAAAACCTCAGTCTAATGATTTCTCCCAATACAAGTTGCAGACTGAAGCAAAATATTGAATCCTCCTTGGCAGAGTTGATTCCTCAAATTACGTGTGATGGGTTGACTCTTGGCATCTTAAATGAGAGAAGATCGATCTCCTCACCTGAAGGGATAACTTGTATTGATGTTTCTCATCTTAGGCTTGCTGCAAAACTAGATTTTGTAACTATTGAAGCTGCCAATACCATCACCAATGAGGTGTGTACGTCATCCTCAGATGCAACGTTTTTTGGCAATGTAGAATGTTGTTGCCCTCTTTTGAGACGACCAGTATTGGCTACTCACAAGGAGGAAGATCTAGTTGAAGTGGGAAATAAAAGAAACAGAGTTCAATGTCAAGACTTGTCTCCTGCAAAGTTGTCCACAGCGAAAGCTTCGGCTTCTCACCCAGAGTCTATGAAGGAAAACTTCTTCAATGGTTATTATTATGCTCCTCTTAAGTTCACGGGAAGCAATAGCCCTGAATCTATCTTGAGAAGCTTGGCTATGACGTATGACAATATTCCTTCCATCATTAGGAGGAGAACACGCAATAAAAGAACTCCTGAAGTTGTATCTGAGGGTGTTGTGAATAATTTACATAATTTGAATTTGAAGCAGGGTGGTGTCATGTATTAA 1326 0.4087 MVDVKKEAEEFSFDSHDKGDRQQLGFSTPVSRKRVRARRSTKGCWSEEEDSRLLEAVKKHNGKNWKKIAAYVPGKTDVQCFHHWLKVVNPELVKGSWTKEEDDCIIDQVAKYGCKRWSIIAKYLPGRIGKQCRERWHNHLDPAIKKDAWTEEEESMLAFYHEIYGNKWTQIARFLPRRTDNAIKNHWNCSIKKLEASSPGCDVNAARDFITGKMNMLVKDEDQNLSLMISPNTSCRLKQNIESSLAELIPQITCDGLTLGILNERRSISSPEGITCIDVSHLRLAAKLDFVTIEAANTITNEVCTSSSDATFFGNVECCCPLLRRPVLATHKEEDLVEVGNKRNRVQCQDLSPAKLSTAKASASHPESMKENFFNGYYYAPLKFTGSNSPESILRSLAMTYDNIPSIIRRRTRNKRTPEVVSEGVVNNLHNLNLKQGGVMY 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0730 441 Gene3D - 94 145 - -
Mibi11g0730 441 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 145 195 IPR017930 -
Mibi11g0730 441 CDD SANT 148 188 IPR001005 -
Mibi11g0730 441 SUPERFAMILY Homeodomain-like 39 95 IPR009057 -
Mibi11g0730 441 SUPERFAMILY Homeodomain-like 91 187 IPR009057 -
Mibi11g0730 441 ProSiteProfiles Myb-like domain profile. 89 140 IPR001005 -
Mibi11g0730 441 PANTHER MYB PROTEIN-RELATED 41 86 - -
Mibi11g0730 441 ProSiteProfiles SANT domain profile. 45 80 IPR017884 -
Mibi11g0730 441 FunFam Transcriptional activator Myb isoform A 94 145 - -
Mibi11g0730 441 ProSiteProfiles Myb-like domain profile. 141 191 IPR001005 -
Mibi11g0730 441 MobiDBLite consensus disorder prediction 13 32 - -
Mibi11g0730 441 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 42 88 IPR017930 -
Mibi11g0730 441 Gene3D - 148 192 - -
Mibi11g0730 441 Gene3D - 41 93 - -
Mibi11g0730 441 FunFam Transcriptional activator Myb isoform A 41 93 - -
Mibi11g0730 441 CDD SANT 96 140 IPR001005 -
Mibi11g0730 441 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 89 144 IPR017930 -
Mibi11g0730 441 ProSiteProfiles Myb-like domain profile. 37 88 IPR001005 -
Mibi11g0730 441 Pfam Myb-like DNA-binding domain 42 87 IPR001005 -
Mibi11g0730 441 Pfam Myb-like DNA-binding domain 94 140 IPR001005 -
Mibi11g0730 441 Pfam Myb-like DNA-binding domain 146 188 IPR001005 -
Mibi11g0730 441 SMART sant 145 193 IPR001005 -
Mibi11g0730 441 SMART sant 41 90 IPR001005 -
Mibi11g0730 441 SMART sant 93 142 IPR001005 -
Mibi11g0730 441 CDD SANT 45 88 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0730 Mibi-ChrMibi11 18119920 18123889 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0730 30 193 MYB Transcription Factor Family AT5G02320 63.415 9.33e-72 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi11g0730 Myb_DNA-binding 3.4e-17 CL0123