Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0715 ATGCTTTTGGGCCTGTCTCTCGTTTTCATCAAACTTGCCTTTCATGTTGGCAGCACAATGGGAGATGGGCGGAAACGCATCGCTATCGACAAGAACCCTGACACAGTATATGTGTGCCTTGTAAAGGGTGTCGTGGTACCTTTCATTTCTGCATTGGAGCTTCGACCTCTTAGCAATTCTATTTACCAAACTCAATCGCCTTCTCAATCACTTTTAATCAATCAAGGGGTATTTGATATTGCCTCCACCAGTCCCGCCACACACAGCAGGTACGAGGATGATATCTATGATCGAATGTGGCGCAAAATGGATTTACTATATTGGTATCAGATTAACGGGTCTGTAGATATTGATCTTTCAAGCACAAACGATTCTTATAAGTTTCCCTCTGAAGTGCTGAAATCTGCAGCCCAATCATGGAATCTCTCCTATGCATTAAGCTTTGATTATGACTATGTATGGAAAGACCTCGACAGGTCTTCCGAATATCTCGTCTATTTTCACTTTTGTGAAATTCAATCACTTCCACCACGGCGAAAAAGAATACTGAATATTACTATTGGTGGTGATGGAAACGTTTTCTCTCAACAACCTATAATTCTTGAATACTTGAAACCGCAAACCATTGTTTCTCAAAGTCATGGTTATGTTCGTTTTAGCATCAGCGCAACATCAGAATCCTATGCTCCTCCAATCCTTAATGCTTTTGAGAGTTGGAGTCCCTGTTCGATACCAGAATTTCTGGCTGACCTGCCGAAGTTGAAAGTTCTCTTTGGCTGTAATCTTCCTGCTGGTTTCTATAGGAGTATGGATCTTCAAAACCAAAAAATTAAAAGAATTCTCAGAATGACTGATAATTTGCAAGACTTAATTGGAGAGGGAGGATTTGGGAAGGTTTATTATGGCACTCTAAGAGATAATATTCAAGTTGCTGTGAAAATACTTTCTCAATCATCAATGCAAGGTTTCAAAGAATTTCGATCAGAGGTAGAACTCTTAATGGTTATTCATCATAGACATTTGGTTTCTCTGATTGGCTACTGTGAAGAAGGTAGTGTGAGGGCATTAATTTATGAATATATGGCTAATGGCAATCTCCAACAGCATTTATCAGTGGAGAGCCCTAATGTTTTGAAATGGGACGAGAGGCTTCAAATTGCATTGGATGCTGCACGAGATTTCAAAGTTCTGGAAACCTAA 1200 0.3983 MLLGLSLVFIKLAFHVGSTMGDGRKRIAIDKNPDTVYVCLVKGVVVPFISALELRPLSNSIYQTQSPSQSLLINQGVFDIASTSPATHSRYEDDIYDRMWRKMDLLYWYQINGSVDIDLSSTNDSYKFPSEVLKSAAQSWNLSYALSFDYDYVWKDLDRSSEYLVYFHFCEIQSLPPRRKRILNITIGGDGNVFSQQPIILEYLKPQTIVSQSHGYVRFSISATSESYAPPILNAFESWSPCSIPEFLADLPKLKVLFGCNLPAGFYRSMDLQNQKIKRILRMTDNLQDLIGEGGFGKVYYGTLRDNIQVAVKILSQSSMQGFKEFRSEVELLMVIHHRHLVSLIGYCEEGSVRALIYEYMANGNLQQHLSVESPNVLKWDERLQIALDAARDFKVLET 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0715 399 Pfam Malectin-like domain 32 238 IPR024788 -
Mibi11g0715 399 SUPERFAMILY Protein kinase-like (PK-like) 282 392 IPR011009 -
Mibi11g0715 399 Gene3D - 71 237 - -
Mibi11g0715 399 ProSitePatterns Protein kinases ATP-binding region signature. 291 313 IPR017441 GO:0005524
Mibi11g0715 399 Pfam Protein tyrosine and serine/threonine kinase 287 398 IPR001245 GO:0004672|GO:0006468
Mibi11g0715 399 Gene3D Transferase(Phosphotransferase) domain 1 271 399 - -
Mibi11g0715 399 FunFam receptor-like protein kinase FERONIA 264 360 - -
Mibi11g0715 399 ProSiteProfiles Protein kinase domain profile. 285 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g0715 399 PANTHER OS07G0107800 PROTEIN-RELATED 273 393 - -
Mibi11g0715 399 SMART tyrkin_6 285 399 IPR020635 GO:0004713|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0715 Mibi-ChrMibi11 17537639 17545013 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0715 276 397 Receptor kinase-like Gene Family AT2G19210 58.197 1.77e-40 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Mibi11g0715 Malectin_like 2e-38 CL0202