Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0711 ATGGGTTCTTCTTTTCTGAACACCCCATATAAGCCATGGACACCTGCTGACGCTGTCCTTCGAGATTGTTCTCAAGGAATCTGCAGCTTCTATTGCCCTCAATGGTGCTCTGTCATCTACCCTCCTCCCCCTTCTCCTTCTCTCACCGCCACTGTCACCGCCGTCACCGTCACAGCCGGTGACGATAACAGCAACGACTCTTCTTCGTTTAGACTCTCCCCCCTCGTAGTCGCACTCATCGGAATCCTCGCAAGTGCCCTCGTCTTAATCACCTACTACGCCATCATCTCTCGCTTCTGCTCGAGACGACAACGAATCCACCAAAACGACACCAACCAATTAGTAAACGACAACGACGAGTCAGCAATCCAATCCTCGTCGTCTGGCTTAGACGACGCCGTAATAAGATCCATCACAGTCTGTAAGTATCAGAAAGGAGATGGTTTAGTCGATGGTACGGATTGCTCTGTTTGTCTTAGCGAATTCCAAGATTCTGAGAGTTTGAGGTTGTTACCTAAATGTAACCACGCGTTTCATCTTCCTTGTATTGATACATGGTTGAAATCACATTCAAGTTGCCCTCTTTGTAGATCTAATATCGTTATATCTGATAATTCCTCGTCGTCGTCTGGGAATTTGCCAAATCAAAGAGAGAGTGTGAGTGTGTCTGCGTTGGAACATCAGTACAGGAATGATGATACTGTGATAGTGATTGAGGGTTCAGAGCATGAAATTCAGGTGGGATTTGGAGGGGATTTGGAGGGGAGGAATAGGACCGGATTGAATCAAGGAAGGTTGTTGTTGGTTGCTGATATTTTGAGGAGTGGTGAAGATGATGAAGATGAGGATTATTATGAAGAAGTGAAGATTGGATCGTCAAAGCGAAATCGGAGAGAGAGGAGAAAATGA 909 0.4609 MGSSFLNTPYKPWTPADAVLRDCSQGICSFYCPQWCSVIYPPPPSPSLTATVTAVTVTAGDDNSNDSSSFRLSPLVVALIGILASALVLITYYAIISRFCSRRQRIHQNDTNQLVNDNDESAIQSSSSGLDDAVIRSITVCKYQKGDGLVDGTDCSVCLSEFQDSESLRLLPKCNHAFHLPCIDTWLKSHSSCPLCRSNIVISDNSSSSSGNLPNQRESVSVSALEHQYRNDDTVIVIEGSEHEIQVGFGGDLEGRNRTGLNQGRLLLVADILRSGEDDEDEDYYEEVKIGSSKRNRRERRK 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0711 302 MobiDBLite consensus disorder prediction 278 302 - -
Mibi11g0711 302 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 130 206 IPR013083 -
Mibi11g0711 302 FunFam RING-H2 finger protein ATL54 130 203 - -
Mibi11g0711 302 PANTHER RING-H2 FINGER PROTEIN ATL16 63 242 IPR044600 GO:0016567|GO:0016740
Mibi11g0711 302 SMART ring_2 155 196 IPR001841 -
Mibi11g0711 302 SUPERFAMILY RING/U-box 141 203 - -
Mibi11g0711 302 Pfam Ring finger domain 154 197 IPR001841 -
Mibi11g0711 302 CDD RING-H2_PA-TM-RING 154 197 - -
Mibi11g0711 302 ProSiteProfiles Zinc finger RING-type profile. 155 197 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0711 Mibi-ChrMibi11 17417679 17418587 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0711 12 294 C3H Transcription Factor Family AT3G03550 40.938 3.70e-69 217