Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0696 ATGTTGCTGGGGCAAGCTTCTTCTCCAGTTAGCTTCAGAACCAAACCCAATTGCTTGGAATTGCAGATTCAAAGCCATGCGCGTCTCTCTTCCTTTGCTCATACTTGTTTCTACGACACGAAAATGCTGCGCGTAAGAGTCGGAAATGCAATTCTCGTTAGAGCTGGGAATTATTCTTCCGCGCCCAAAGACGTTCTTTCTTGGAACCCCAACATCACCAGAGATGGCTTCAGCTCGAATGTAGAGAATTCATCAGATATAAGCATTGTAACTGAAGGTTTTGAGAGTGATTCGGTTGTTACAAATACTGACTCTACAATAAAATCTAAGGGGAGGTTATCTGGAAGTTTTGGCAAACTGAAGGCACAGAAAGTCAAGGCCATCATCCACAAAACCATTCATAAGAAGCACAAAAGAAGCATCAATGATGAAAACATAGTTGTAGAACATCCAGAATTAGGAATAGAAGATGACTGGGAACAATCTGAGGGATCTAATTCTCACGTAGGATATCAGAACACTCCTGATAAATTTCAAAAAAATGATAATAGAATAGAGAGCTCAGGTGTATTGGTTGAAAGACATTCCTCCTCTCATTTAAAAGGATGGGGTGGTGGAGAATCTTCACGTACTTTTAAGACCGAATCACAGAAACTGTTAAGAGAACAGAGAAAACCATTGTCTGACAGTGACTTTTTCAGTCGAAAGTCCTTCAAAGATTCAGGGTACAGTGAATATATGATTGAATCTCTGGCCAAGCAATTTTATCGACGGCCTTCACATATACAGGCCATGTCATTTGAACCAGTATATATTGGAAAGAGTTGTATAATAGCTGATCAAAGTGGCTCTGGAAAGACTCTAGCATATCTTGCACCAATAATTCAGAAGCTTAGACAAGAAGAATTGGAAGGAATTGCCAATTCCTCTTCACAAGCTCCTCGAGTGGTGATATTGGCACCAACAGCTGAGTTAGCTTCTCAGGTGTTAGCTAACTGTCGATCAATGTCAAAATCTGGGGTTCCATTCAAATCTATGGTTGTAACAGGTGGCTTTCGACAGAAAACTCAACTGGAGAATTTAGAGCAGGGAGTTGATGTTTTAATAGCAACACCTGGCCGTTTTATGTTCCTCATCAAGGAAGGCTTCTTGCAGTTGACAAATCTAAAATGTGCGGTGTTGGATGAGGTAGATATACTTTTTGGTGATGAGGATTTTGAAGTGTCACTTCAGTGCTTGATTAATTCTTCACCAGTTGCTACACAATATTTATTTGTGACTGCAACTTTACCAAAAGATATTTACAATAAACTTGTTGAAGTTTTTCCTGATTGTGAAGTGATCATGGGACCTGGTATGCATCGGATAAGCTCTCGACTTGAGGAGGTTCTAGTTGATTGCAGTGGAGCTGATGGGGAAGAAAAATCCCCCGATACAGCATTTCTTAATAAGAAAACAGCTCTTCTACAGATTGCAGAAGGAAGTCCTGTCCCAAAAACAATTGTCTTCTGCAATAAAATTGAAACCTGTAGAAAAGTTGAGAATGCATTGAAGCGTTTTGATAGGAAAGAGACTCGTGTGCAAGTTCTACCTTTCCATGCTGCCATGACACAGGAAGTACGGCTTGCTAATATGGAACAGTTTACACGTTCTCAACCAAAGGAAGTCTCCCAATTTCTAGTTTGCACTGACAGAGCGTCGCGGGGGATTGACTTTACCGGAGTGGATCATGTCATACTTTTTGACTTTCCACGTGATCCAAGCGAATATGTCCGCCGTGTCGGAAGAACTGCAAGAGGTGCCGTTGGAAGAGGCAAGGCATATATCTTTGTGGTAGGAAAGCAAGTATCTCTTGCACGAAAAATCATGGATAGAAATAGGAAGGGTCACCCTCTACATGATGTGCCTTCTGCCTATGAGCTCTTGAAGTAG 1932 0.412 MLLGQASSPVSFRTKPNCLELQIQSHARLSSFAHTCFYDTKMLRVRVGNAILVRAGNYSSAPKDVLSWNPNITRDGFSSNVENSSDISIVTEGFESDSVVTNTDSTIKSKGRLSGSFGKLKAQKVKAIIHKTIHKKHKRSINDENIVVEHPELGIEDDWEQSEGSNSHVGYQNTPDKFQKNDNRIESSGVLVERHSSSHLKGWGGGESSRTFKTESQKLLREQRKPLSDSDFFSRKSFKDSGYSEYMIESLAKQFYRRPSHIQAMSFEPVYIGKSCIIADQSGSGKTLAYLAPIIQKLRQEELEGIANSSSQAPRVVILAPTAELASQVLANCRSMSKSGVPFKSMVVTGGFRQKTQLENLEQGVDVLIATPGRFMFLIKEGFLQLTNLKCAVLDEVDILFGDEDFEVSLQCLINSSPVATQYLFVTATLPKDIYNKLVEVFPDCEVIMGPGMHRISSRLEEVLVDCSGADGEEKSPDTAFLNKKTALLQIAEGSPVPKTIVFCNKIETCRKVENALKRFDRKETRVQVLPFHAAMTQEVRLANMEQFTRSQPKEVSQFLVCTDRASRGIDFTGVDHVILFDFPRDPSEYVRRVGRTARGAVGRGKAYIFVVGKQVSLARKIMDRNRKGHPLHDVPSAYELLK 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0696 643 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 159 639 - -
Mibi11g0696 643 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 236 264 IPR014014 GO:0003724
Mibi11g0696 643 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 314 622 IPR027417 -
Mibi11g0696 643 Gene3D - 470 633 IPR027417 -
Mibi11g0696 643 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 483 643 IPR001650 -
Mibi11g0696 643 SMART helicmild6 511 601 IPR001650 -
Mibi11g0696 643 Pfam DEAD/DEAH box helicase 261 434 IPR011545 GO:0003676|GO:0005524
Mibi11g0696 643 MobiDBLite consensus disorder prediction 196 217 - -
Mibi11g0696 643 CDD SF2_C_DEAD 484 611 - -
Mibi11g0696 643 Gene3D - 206 448 IPR027417 -
Mibi11g0696 643 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 267 448 IPR014001 -
Mibi11g0696 643 SMART ultradead3 255 463 IPR014001 -
Mibi11g0696 643 Pfam Helicase conserved C-terminal domain 487 600 IPR001650 -
Mibi11g0696 643 CDD DEADc 247 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0696 Mibi-ChrMibi11 16893851 16901895 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0696 237 622 Eukaryotic Initiation Factors Gene Family AT3G19760 27.649 3.18e-28 115