Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0658 ATGTTAATGCAGAGTTCTCTTCCTAGTTCAATTGAAGCTGCTATATTTCATGTATCTGATAAAGCGAAGGAAGATGCTCTATGTGACCGGATGCCTAGTGCTGAAACTTGGCAGGTGTGCTTGAAATGCAAAAAATACCCTCTTTACTGCTGCAGAAAAGTTGAAGCAATGCAGGAGCAAGAGGATAGAAGGAATGATGATGTTCCATGCTGCACAGAAGTTGAAGCAATGCATGAGCAAGAGGTTAGAAGGAATGATGATGTTCCATGCTGCAGAGAAGTTGAAGCAATGCAAGAGCAAGAGGATAGAATGAACATTGGGGTTCCATGCTGCAGAGAAGTTGATGCAATGCAAGAGCAAGAGTATAGTTTGAATGTTGATGTTCCATGCTGCGGAGAAGTTGAAGCAATGCAAGAGCAAGAGTATAGAATGAATGTCAATACTCCATGCTGCAGAAAAGTTGAAGCAATGCAAAAGGTAGAGGATGGAAGGAATGATGATGTTCCATGCTACAGAAAATTTGAAGCAATGCAAGAGGTAGATGATGGAAGGAATGGTGATGTATGCTGCAGAAAAATTGAAGCAATGCAAGAGGTAGAAGATAGAAGGATTGATGATGTTCCATACTGCATAAAAGTTGAAGCAATGCAAGAGGTAGAGGATAGAAGAAATGATGATGTTCCATGCTGCATAAAAGTTGAAGCAATGCAAGAGGTAGAGGATAGAAGGAATGATGATGTTCCATGTCACAGAAAAATTGAAGCAATGCAAGAGGTAGAGGATAGAAGGAATGATGATGTTCCATGTCACAGAAAAATTGAACCAATGCAAGAGGTAGAGGATAGAAGGAATGATGCTGTATGCTGCAGAAACATTGAAGCAATGCAAGAGGTAGAGGATAGAAAGATTGATGATGTTCCATGCTGCAGAAAAGTTGAAGCAATGCAAGAGGTAGAGGATAGAAGTAATGATGATGTTCCATGCAGCTCAAACTGTATAAGCAGCTTAGACAGACCAACTGCCAGTACAATGACTGGAAACACTGTGCCTAATATAGTTTACAGGAGAAAGAAGCTACGGAAGAATTCAACCGCACCGCTTTTAAAAGTAGGACCTATGTCTCTGCCAGCAAATGCCAATTGCCCTTCATTCATAAGCCTCTGTGCTAATAAATTATCATTGGAGCATCAGCCAGCCAGCTCTCAAGTTGAGCAAGATATTGAGATGGTTAAAGACCCTGCTTCACCCATTGTCTTGTGCGAAACAGCGATAGACAAAAGCATACCAAAAAATTTAGGTATTGAAAGCATTAATGATAGTTGCTCCTCATCAAAATCAATCATGGAAATTGTTTCAGATTCCATACAAACTAGAGGGGATGACACTGGCGAATGCTCCTCATCTAGTGTATTAGACACGGAGGTCCCTAGAGAAGACCTATCCGCAAAGGATTTCTGCATCGAAGTTCTAAGAAGCCATGGACTCCTAGGAGGAGATTCTCATGCTGATACTGTAGCTTGTCAAACACAGGCTGCTGCCTCTGGTGATAGTTTCAGTTCTCGGTCATGCAAAATATGTGGCCATTCAGGTGGCTCATCGAACATGCTTATATGTGATCATTGTGAACAGGCATACCATCCATCCTGCATCATTCCACGTATGAAGAAGTTACCAATTGATGAATGGTTTTGTCATTCGTGTATAAGAAAAAAGCAAAAAATTCTTAAGGAGAAGATTATTGGAAGTTCACCAACTATCAACAGTGAAAAAGAAGTATGCAGATCTTCCTCAGTTAATGGAGGACTGAATCCTATACTGTTGATGTTGAATGATTCTGTACCAAGCACAAGTGGTGTACGGGTTGGTAAAGGTTTTCAAGCAGAAGTTCCTGAATGGTCAGGTCCAATAGGAAGTTATGATGACTGTGGTGAACTGTTGAAAATTGATTTTTCAGAATTTTTGAGTTTTCAGGAAAGGAATCTCAAAAGGTCGAGTAGACTCAGCTCGATTTGTAACTGGCTTCAGTGTCAGGAGGTGGTTGATAGAGCCAAAGGAACTATATGTGGGAAATGGCGCAGGGCTCCTCTGTTTGAAGTTCAAACTGATAATTGGGAGTGCTTTTGCGCCATCCCTTGGGATCCAGCTCATGCTGATTGTGCTGTGCCTCAGGAGTTGGAAACAGATCAAGTTCAGAAGCAAGTGAAGTATATAGAAATGAGGGAAGTGAGAATCAGGAGGAGGGAGGACAAGAGGGTAAGGGGAGAAAAAGAAACTGGGGAGAGTGTGACAGCAAAGTATGACACTAGTTATTCATTAAAAGAGTTCTGA 2328 0.4132 MLMQSSLPSSIEAAIFHVSDKAKEDALCDRMPSAETWQVCLKCKKYPLYCCRKVEAMQEQEDRRNDDVPCCTEVEAMHEQEVRRNDDVPCCREVEAMQEQEDRMNIGVPCCREVDAMQEQEYSLNVDVPCCGEVEAMQEQEYRMNVNTPCCRKVEAMQKVEDGRNDDVPCYRKFEAMQEVDDGRNGDVCCRKIEAMQEVEDRRIDDVPYCIKVEAMQEVEDRRNDDVPCCIKVEAMQEVEDRRNDDVPCHRKIEAMQEVEDRRNDDVPCHRKIEPMQEVEDRRNDAVCCRNIEAMQEVEDRKIDDVPCCRKVEAMQEVEDRSNDDVPCSSNCISSLDRPTASTMTGNTVPNIVYRRKKLRKNSTAPLLKVGPMSLPANANCPSFISLCANKLSLEHQPASSQVEQDIEMVKDPASPIVLCETAIDKSIPKNLGIESINDSCSSSKSIMEIVSDSIQTRGDDTGECSSSSVLDTEVPREDLSAKDFCIEVLRSHGLLGGDSHADTVACQTQAAASGDSFSSRSCKICGHSGGSSNMLICDHCEQAYHPSCIIPRMKKLPIDEWFCHSCIRKKQKILKEKIIGSSPTINSEKEVCRSSSVNGGLNPILLMLNDSVPSTSGVRVGKGFQAEVPEWSGPIGSYDDCGELLKIDFSEFLSFQERNLKRSSRLSSICNWLQCQEVVDRAKGTICGKWRRAPLFEVQTDNWECFCAIPWDPAHADCAVPQELETDQVQKQVKYIEMREVRIRRREDKRVRGEKETGESVTAKYDTSYSLKEF 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0658 775 Pfam PHD-finger 523 569 IPR019787 -
Mibi11g0658 775 SMART PHD_3 522 568 IPR001965 -
Mibi11g0658 775 SUPERFAMILY FYVE/PHD zinc finger 516 574 IPR011011 -
Mibi11g0658 775 ProSiteProfiles Zinc finger CW-type profile. 667 727 IPR011124 GO:0008270
Mibi11g0658 775 PANTHER BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN PROTEIN 1A 517 577 - -
Mibi11g0658 775 ProSitePatterns Zinc finger PHD-type signature. 523 567 IPR019786 -
Mibi11g0658 775 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 437 580 IPR013083 -
Mibi11g0658 775 Gene3D - 671 736 - -
Mibi11g0658 775 MobiDBLite consensus disorder prediction 749 775 - -
Mibi11g0658 775 FunFam uncharacterized protein LOC106759733 isoform X4 671 736 - -
Mibi11g0658 775 ProSiteProfiles Zinc finger PHD-type profile. 520 570 IPR019787 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0658 523 572 C2H2 Transcription Factor Family AT3G01460 36.000 3.79e-06 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Mibi11g0658 PHD 1.1e-09 CL0390