Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0652 ATGAGCTCATCTAACTTGCAGAAACTCAAACATGATAATACAACAAAAGATCAAGAAGCAGAAGAGAACATTCTTCTACATCACATAGATAGAATACCATTGTCATCGGAGCCAACATGGCCGTCACCCCACGACAAGAACAATAACGACGATGAAGAAGTTGTGTATGCAGACAAGGTGAAAGTGCACATCTTTGACTGGGAATCTTATTCAAATTCCAAGGCGGCAGCATCGGCGGCCACGGTGGTGCCACCATTCTCATGGCGGAAGCTATGGTTGTTCACCGGGCCGGGGATATTGATGAGCGTGGCTTTTTTGGATCCAGGGAATTTGGAGGGAGATTTACAAGCAGGAGCTATTGGAGGGTACTCATTGTTATGGTTATTAATGTGGACGACAATTATGGGGTTGTTGATACAGCTTTTGTCGGCTAGGCTTGGTGTGGCAACGGGGCGGCACTTGGCGGAGTTGTGCCGGGAAGAGTACACAAGGTGGGCAAGGTTGGTGCTTTATGTGATGGCAGAAATGGCATTGATAGCTGCAGATATTCAGGAGGTTATTGGTAGTGCCATAGCCATTAAGATTTTGAGTAATGGGTTTTTGCCTATTTGGGCTGGGGTTGTAGTCACTGCCTTGGATAGTTTTGTGTTCCTGTTTCTTGAGAATTATGGAGTGAGGAAGCTGGAAGGTGTTTTCGCAATGTTCGTTGGAACTATGGCCCTTTCTTTCGCTTGGATGTTTATTGATACAAAGCCTAATCCTAAACAACTTCTTATAGGTCTTTTGGTGCCAAAAGTAACCTCAAAAACACTTCGTCAAGCGGTGGAAATTATAGGCTGTGTTATAACCCCACACAACGTATTTCTCCACTCAGCCCTAGTTCAATCAAGAAACATAGACATAAAAAACAAAGGCCAAGTCCAAGAAGCTCTAAATTACTACACAATAGAATCCACACTTGCACTTCTTGTAACATTCTTCATCAATCTCTCGGTCATGACCGTCTTCGCTAAGGTTTTCTACGGCTCCTATCAAGCTGGTTCCATTGGACTAGTGAATGCCGGTCAGTATCTACAAGAGAAATATGGTGGAGGGTTTTTCCCTATATTGTATATATGGGGAATAGGGTTATTGGCTGCTGGACAAAGTAGTACTATTACTGGTACTTATGCTGGACAATTTATTACTGAAGGGTTTTTGAAACTACGTTTAAAGAAATGGTTAAGGGCTTTGATTACAAGAAGTTTAGCCATTGTTCCTACCATGATTGTGGCTCTTATTTTTAATACTTCTGAAGGGTCTTTGGATGTTTTGAATGAGTGGCTTAATGTGGTTCAGTCTATTCAGATTCCTTTTGCTCTTATTCCTCTTCTCACTTTGGTGTCTAAAGAGGAGGTCATGGGATCATTCAGAATCGGACCCCTTGTGGAGAAAGTGGCATGGACAGTGGCAATGTTGGTAATTCTGGTATATGGATACATGTTGCTGGACTTCTTCCTATCAGAAGTGAAAGGACTTGTGTTTGGTTTTGTGGTAATGATTTGTGCAGCTGCTTGGTTATCATTCATTGCTTATTTGGTTAAACACAGTGGTGCCTTTTCTTCTTTCCTCCACACTTCTCGTGGCTTCTCCTCTCTTTCTCCCAATTAA 1650 0.4255 MSSSNLQKLKHDNTTKDQEAEENILLHHIDRIPLSSEPTWPSPHDKNNNDDEEVVYADKVKVHIFDWESYSNSKAAASAATVVPPFSWRKLWLFTGPGILMSVAFLDPGNLEGDLQAGAIGGYSLLWLLMWTTIMGLLIQLLSARLGVATGRHLAELCREEYTRWARLVLYVMAEMALIAADIQEVIGSAIAIKILSNGFLPIWAGVVVTALDSFVFLFLENYGVRKLEGVFAMFVGTMALSFAWMFIDTKPNPKQLLIGLLVPKVTSKTLRQAVEIIGCVITPHNVFLHSALVQSRNIDIKNKGQVQEALNYYTIESTLALLVTFFINLSVMTVFAKVFYGSYQAGSIGLVNAGQYLQEKYGGGFFPILYIWGIGLLAAGQSSTITGTYAGQFITEGFLKLRLKKWLRALITRSLAIVPTMIVALIFNTSEGSLDVLNEWLNVVQSIQIPFALIPLLTLVSKEEVMGSFRIGPLVEKVAWTVAMLVILVYGYMLLDFFLSEVKGLVFGFVVMICAAAWLSFIAYLVKHSGAFSSFLHTSRGFSSLSPN 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0652 549 MobiDBLite consensus disorder prediction 1 21 - -
Mibi11g0652 549 PRINTS Natural resistance-associated macrophage protein signature 381 400 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mibi11g0652 549 PRINTS Natural resistance-associated macrophage protein signature 170 196 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mibi11g0652 549 PRINTS Natural resistance-associated macrophage protein signature 225 246 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mibi11g0652 549 PRINTS Natural resistance-associated macrophage protein signature 443 462 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mibi11g0652 549 PRINTS Natural resistance-associated macrophage protein signature 274 297 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mibi11g0652 549 PRINTS Natural resistance-associated macrophage protein signature 409 426 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mibi11g0652 549 PRINTS Natural resistance-associated macrophage protein signature 200 219 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mibi11g0652 549 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 89 467 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mibi11g0652 549 Pfam Natural resistance-associated macrophage protein 112 473 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mibi11g0652 549 Hamap Divalent metal cation transporter MntH [mntH]. 77 499 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mibi11g0652 549 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 76 528 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0652 Mibi-ChrMibi11 15514104 15517774 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0652 48 530 Inorganic Solute Cotransporters AT1G47240 71.014 0.0 715