Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0625 ATGGTAAACATTGAGAAAGAAGAAGAGGATCCTTCTGAATTGTATTTCAAAAAGGGTTGGCCAAAATTTGTGCAAGAAAATGCTTTAGAGGCTGCAGATTTTTTATTCTTCGAATTTGATGGGAAGTCAAGATTCGAAGTTATTATCTTCGGGAAATCTGCATGCGAGAAGAAGCTTGAGAGGCAGATGTCACGAGCACATATGAATCGAAATAAGCACAAGAAACAACATAGTAAACAGACAGCTGCAACTCAAGATTGTCGGGATAATCTAAAAGGAAAAGATCCGATGTTTGTTGAGATTAAGGAGGAGAGAGAAAATTTTGATGATCCTGGAACTTCTAACCAAGACATGAGAGGTGAAACGTGGAAATTCCTATGTCATGAAGAAGGAGGGGAGGAGGAGGAAGAAGATGAAGAAGAAGAAGAAGATGATGATGATGATGATACTGACGATGAGGACTATGATGTATACTCACATATTGACTCATTAGGGGAAGGAAGCAACATGGGCATTATTCCCTCATTCACAGTACAACTCCAGCTTGCCTCAGCTAATAAGGGTGTCATGTGCATTCCAACCGATTTCTTCAAGAGGTATATGAGAAAGAAGAAACTAGAGGTGGAGATGGAGACGGTGAATGGAGTGTGGAAAGTCACATCACTTCCCCACATCAAAAGAAATAGAATGTTTGCTAGGTTCAGTAGGGGATGGTCAGAATTTGCTCGAAGGAATCAGTTTCAGGCCGGAGAGACTCTCATTTTTAAAATGATTCGAAGAGGTAAATATCCCAAGTTCATGGTTCATAAGCAATCAACTGTCTCATCAGATCAGACTTGA 840 0.4012 MVNIEKEEEDPSELYFKKGWPKFVQENALEAADFLFFEFDGKSRFEVIIFGKSACEKKLERQMSRAHMNRNKHKKQHSKQTAATQDCRDNLKGKDPMFVEIKEERENFDDPGTSNQDMRGETWKFLCHEEGGEEEEEDEEEEEDDDDDDTDDEDYDVYSHIDSLGEGSNMGIIPSFTVQLQLASANKGVMCIPTDFFKRYMRKKKLEVEMETVNGVWKVTSLPHIKRNRMFARFSRGWSEFARRNQFQAGETLIFKMIRRGKYPKFMVHKQSTVSSDQT 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0625 279 Gene3D - 167 273 IPR015300 -
Mibi11g0625 279 ProSiteProfiles B3 DNA-binding domain profile. 175 272 IPR003340 GO:0003677
Mibi11g0625 279 MobiDBLite consensus disorder prediction 131 156 - -
Mibi11g0625 279 Pfam B3 DNA binding domain 180 269 IPR003340 GO:0003677
Mibi11g0625 279 Pfam B3 DNA binding domain 10 50 IPR003340 GO:0003677
Mibi11g0625 279 SUPERFAMILY DNA-binding pseudobarrel domain 10 58 IPR015300 -
Mibi11g0625 279 MobiDBLite consensus disorder prediction 129 156 - -
Mibi11g0625 279 Gene3D - 1 55 IPR015300 -
Mibi11g0625 279 ProSiteProfiles B3 DNA-binding domain profile. 1 53 IPR003340 GO:0003677
Mibi11g0625 279 PANTHER B3 DOMAIN-CONTAINING 2 261 - -
Mibi11g0625 279 Coils Coil 56 76 - -
Mibi11g0625 279 MobiDBLite consensus disorder prediction 67 93 - -
Mibi11g0625 279 SMART B3_2 176 272 IPR003340 GO:0003677
Mibi11g0625 279 CDD B3_DNA 174 270 IPR003340 GO:0003677
Mibi11g0625 279 CDD B3_DNA 6 50 IPR003340 GO:0003677
Mibi11g0625 279 SUPERFAMILY DNA-binding pseudobarrel domain 173 267 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0625 Mibi-ChrMibi11 13934275 13936173 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0625 3 57 REM Transcription Factor Family AT4G33280 46.429 3.68e-09 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mibi11g0625 B3 3.7e-10 CL0405