Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0624 ATGCCTCAGAGGAAGAAAACCAGCTCTTCTTCCAAGAAATCGAATCCGAACAGCGAGGCTCAACCATCCAAGTTTGGCATTCAACACTTTTTTGAGCGCCACACTCAGAATGCTCTTCTGGCCTCTCAGAAGTATACAAAAGATGATGCATCTGCGAATCGTCCAGTTTCTGCCCTCCAAGATTCCAAATCTGTTGCACCTATTAACTCTCATGTTTCTTCTATTACTGGGTCGCAAGCTATTGCTCCAAAGAGTTTAGCTTCCGTTCTTCCCAGAGCTGAATATAATTTGAAATCAGACTTGGCTGGGCCAAAAATGGGGAATTCGGAATCGCAAAAGCGTAAAGACATCTTGCCCCTAGGAGCAAATGAATCCAATAACGTGTCGCAGAATACTCCTTCAGAGAATTTGTCAGTACCAGGGTTTGATGCAGTGGAAAATCTCCTTGAGGCATCTCCGGAAATTTCTAAGATTGTGCCCCATAAGCGCTCTAAGTTCTCGCCTGGGATGACTTCTCTGAGTAAAGGTGGCAAATTTGAAAAGTTACTTAATTCACCAGCTACAAAGGATGCTGAGAGGTCAACAGTGTCTAAGAATGAAAAACACTTGAAACGTTTAAACCCAGACCCAGACATAGTTTTTAATGTCAGTTCAACTACTGTGAATGATTCTGGCATAATTACTGGACAGAGCCCCTTCAGAACTCCACCATCTTTATCCTTTTGCTCTGACAAGGCATTACTTGAACTGTTAGATCAAGTTGAAGATGCCATATGTATTGAAAATGCTACAATTTGTGATAAAAGTGCAAATTACATCAAGCCTCAAGATAGAATTGCTGATAATCTGCCCATCGGAGTTTATTCTGCAGCAGAGAGCACTAAAATTCATACACCAAAAGAGGCCATTGGTGGGTCCAATTCTAATTATTTGGTGTTGGAGGTATCTGAAAACCATGGGCTTGCCAATTCATCTGCTTTACGAGGCCCATACAAGGTGCTTCGTTTAGTGAATGAACAAACTGGAGAAGAGAAGGTTGTAAACTTGTTAGAAGAATGTGTTGTTGCACCTGGAGATACTGTGAATATAATTGGCCAATTTGGTGATCAGGGGCATTGTGATGTAGATCATGATAATAATTTTTTGATTGTACATCCAGATATTCTGGTGTCTGGATCTCGGGTAGCTGCTAGTTTTACTTGTCCAAGGAGAACTGTGTTAGATGAGAGGCTAAAATATAATGAGTACTCAATTGCTGCATTAACTGGAACGTTACTTCATCAAATTTTTCAGGCTGGACTTATCAAGGATAGTCCTACAATAAACTTCTTAGAGGAATATGCACGATTGGTTCTACACAGAAACATTGAAAGCTTGTATGCCTGTGAAGTGAATGAAAATGATGTGCACAAAACCTTGATAGATGCTATCCCACGATTGTTAAATTGGATCAAACTGTTTAAGAATTCAGAGGAAAAGAAAGATGCTTATGTTGATTTTGGACGCGATGATGGTATAAAGAAAGTTGAAATATCCGAGGTGATTGATATTGAGGAGATGGCATGGGGTCCTAAATATGGTCTCAAAGGGATGATTGATGCTTCTGTTAGTGTGAAAGTTCTAACAACGGGAAGTGAAGCAGATGAGAAGGTCATGCCATTAGAATTTAAAACTGGGAAAGCAATGTCTGGCCAGTCATCGATAGAACACCGCGCCCAAGTGATTTTGTACACTCTTCTGATGTCTGAGAGGTACCTGAAGACTATTGATTCTGGTCTTCTATATTATCTCCGGTCAGATCAGACAGAGGGCATTGTGGTTCAAAGATCTGACTTAGTTGGGCTAATCATGCGACGTAATGAGCTTGCGAGTGATATTTTGAAGGCACTGACCACACAACAGTTGCCTCCAATGTTACAGAGTCCAAGCATTTGCAGAAGTTGTCGTCAACTTAATGTTTGTAGCATTTATCATAAGGTTCAAGGAGGAAGTACAAAGAGTAGTGGATTGGGAGATGTGTTTGATTCACATACTAATCACCTTTCACCTACTTATTGTAAGTTCCTTTGTCATTGGGATCGTCTGATTGATTTAGAAGCAAAAGAGACTGAGCTTGTGAAGAAAGAGATGTGGCGATCACATACTTTTAAAAGTCATAATAGCACTGGCCTTTCTTCTGTCATCCTTGATGCTTCAAATAAGATTCCATGTCAGAAATCTCTTAAAGATAATTGTTTCATTTATCGTTTTGTACAATGTGGTCCATCTTCTCTATCTGAAGTGTCTGATGGTGATCCTTCTAATGCTTCTACAAATTACTTGGACCACAAACTAAGAACTGGAGACTATGTGATATTGAGCACTGAATCTAGCCGCCAAGCTATTGCTAGTGGTGTGATTACAGATATTAGTCATGCCCATGTTTCTGTTTCCTTTTCAAAGCGCCTGCGGATTCCTGGAAGCATCTCCTCTAGCCAAGATCTCTGTAAGCAGGTTTGGAGAATTGACAAGGATGAAACTGTTACATCATTTGCTATTATGAGGTTTAATCTAGTACAACTTTTTCTACAAAATGCTCAAAGTACTCATCTGAGGAAGATGATTGTTGATCTTGAGGCTCCCAGATTTGACAGTGTATCCATGGTCAGTCAGGACCCAGCAATATCATATGTCTGGTCAGAGAGGAGTTTGAACGACGACCAGCGTAGATCAGTCCTCAAGATTCTTACGGCAAAGGATTATGCACTCATACTTGGAATGCCTGGAACGGGAAAGACATCGACCATGGTCTATGCTGTGAAAGCATTATTAATCAGAGGCACGTCTATTTTGCTGACAGCCTATACAAACTCCGCAATAGATAATTTACTTATCAAGTTGAAAGCTCAGGGAATCGATTTTGTACGTATTGGAAGACATGAAGCTGTGCACGAAGAGGTCAGAGAACACTGCCTTTCAGCAACAAATGTACAAAATGTTGATGAGATCAAAGTAAGGTTAGAACAAGTCAAAGTAGTTGCAGTTACATGTCTGGGCATCACCAGTCCCTTGCTTGCGAACAGGACTTTTGATGTATGCATTATGGACGAAGCTGGGCAGACAACTCTACCAGTGTCCTTGGGCCCTCTCATGTTTTCCTCGATGTTTGTACTTGTGGGTGATCACTATCAACTACCTCCGCTTGTCCAGAGTGCAGAGGCTCGAGAGAATGGAATGGGGATAAGTTTATTTTGTAGGCTTTCTGAAGCACATCCACAAGCCATTTCAGCACTACAGAGTCAGTACCGAATGTCTCAGGGCATCATGGACTTGTCAAATGCCTTGATATATGGTGATCGGTTAAGGTGCGGTTCCACTGAGATTGCTAATGCAAAACTTGAGTTTTCTACCTTAAAATGTGGCTTACCTTGGGTAAAAAATGTTTTAAATCCAGGCAGGCCGGTGATATTCATTGATACTGATAAATTGCCCGCTTTAGAGACAAGAGAACAGAAAACTATAAATAACCCTATTGAAGCTCACATAATCGTCGAGATAGCAAAGGCATTAGTAAGAAATGGAATTGGAGAAGAACATGTTGGCATTATTACCCCCTATAATTCCCAGGCAAATCTCATCCGGCAGGCTGCTTGCATGACTTCGTTGGAGATTCATACCATTGACAAATACCAGGGTAGAGATAAAGATTGTATATTAGTATCTTTTGTGAGGTCTAGTGAAAATCCATCAAGCTGTGCTTCTTCTCTGCTTGGAGACTGGCACAGGATAAATGTGGCTCTCACACGTGGCAAGAAAAAGCTGATCATGGTGGGTTCTTGTAGAACCCTATCAAAGGTTCCATTACTGAAGCTTCTCATAAGAAAGGTTGAGCAACAGTCAGGTACTGTTAGTGTGTCTAAGAAAGATATATATCAGAAAGGGGAGCTCAAAAGGTGTTCCCAGATGAGGTAA 3951 0.4098 MPQRKKTSSSSKKSNPNSEAQPSKFGIQHFFERHTQNALLASQKYTKDDASANRPVSALQDSKSVAPINSHVSSITGSQAIAPKSLASVLPRAEYNLKSDLAGPKMGNSESQKRKDILPLGANESNNVSQNTPSENLSVPGFDAVENLLEASPEISKIVPHKRSKFSPGMTSLSKGGKFEKLLNSPATKDAERSTVSKNEKHLKRLNPDPDIVFNVSSTTVNDSGIITGQSPFRTPPSLSFCSDKALLELLDQVEDAICIENATICDKSANYIKPQDRIADNLPIGVYSAAESTKIHTPKEAIGGSNSNYLVLEVSENHGLANSSALRGPYKVLRLVNEQTGEEKVVNLLEECVVAPGDTVNIIGQFGDQGHCDVDHDNNFLIVHPDILVSGSRVAASFTCPRRTVLDERLKYNEYSIAALTGTLLHQIFQAGLIKDSPTINFLEEYARLVLHRNIESLYACEVNENDVHKTLIDAIPRLLNWIKLFKNSEEKKDAYVDFGRDDGIKKVEISEVIDIEEMAWGPKYGLKGMIDASVSVKVLTTGSEADEKVMPLEFKTGKAMSGQSSIEHRAQVILYTLLMSERYLKTIDSGLLYYLRSDQTEGIVVQRSDLVGLIMRRNELASDILKALTTQQLPPMLQSPSICRSCRQLNVCSIYHKVQGGSTKSSGLGDVFDSHTNHLSPTYCKFLCHWDRLIDLEAKETELVKKEMWRSHTFKSHNSTGLSSVILDASNKIPCQKSLKDNCFIYRFVQCGPSSLSEVSDGDPSNASTNYLDHKLRTGDYVILSTESSRQAIASGVITDISHAHVSVSFSKRLRIPGSISSSQDLCKQVWRIDKDETVTSFAIMRFNLVQLFLQNAQSTHLRKMIVDLEAPRFDSVSMVSQDPAISYVWSERSLNDDQRRSVLKILTAKDYALILGMPGTGKTSTMVYAVKALLIRGTSILLTAYTNSAIDNLLIKLKAQGIDFVRIGRHEAVHEEVREHCLSATNVQNVDEIKVRLEQVKVVAVTCLGITSPLLANRTFDVCIMDEAGQTTLPVSLGPLMFSSMFVLVGDHYQLPPLVQSAEARENGMGISLFCRLSEAHPQAISALQSQYRMSQGIMDLSNALIYGDRLRCGSTEIANAKLEFSTLKCGLPWVKNVLNPGRPVIFIDTDKLPALETREQKTINNPIEAHIIVEIAKALVRNGIGEEHVGIITPYNSQANLIRQAACMTSLEIHTIDKYQGRDKDCILVSFVRSSENPSSCASSLLGDWHRINVALTRGKKKLIMVGSCRTLSKVPLLKLLIRKVEQQSGTVSVSKKDIYQKGELKRCSQMR 1316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0624 1316 Pfam DNA replication factor Dna2 351 538 IPR014808 -
Mibi11g0624 1316 Pfam Domain of unknown function DUF83 542 655 IPR022765 -
Mibi11g0624 1316 MobiDBLite consensus disorder prediction 1 28 - -
Mibi11g0624 1316 CDD SF1_C_Upf1 1101 1290 IPR041679 -
Mibi11g0624 1316 Gene3D - 391 655 IPR011604 -
Mibi11g0624 1316 CDD DEXXQc_DNA2 896 1096 - -
Mibi11g0624 1316 Pfam AAA domain 999 1064 IPR041677 GO:0004386
Mibi11g0624 1316 Pfam AAA domain 897 988 IPR041677 GO:0004386
Mibi11g0624 1316 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 896 1281 IPR027417 -
Mibi11g0624 1316 Pfam AAA domain 1074 1273 IPR041679 -
Mibi11g0624 1316 Coils Coil 1316 1316 - -
Mibi11g0624 1316 PANTHER DNA2/NAM7 HELICASE FAMILY 5 1289 IPR045055 -
Mibi11g0624 1316 FunFam DNA replication helicase Dna2 502 655 - -
Mibi11g0624 1316 Gene3D - 1095 1303 IPR027417 -
Mibi11g0624 1316 MobiDBLite consensus disorder prediction 1 24 - -
Mibi11g0624 1316 Gene3D - 824 993 IPR027417 -
Mibi11g0624 1316 Gene3D - 994 1094 IPR027417 -
Mibi11g0624 1316 FunFam DNA replication helicase Dna2 831 1094 - -
Mibi11g0624 1316 FunFam DNA replication helicase 1095 1308 - -
Mibi11g0624 1316 MobiDBLite consensus disorder prediction 177 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0624 Mibi-ChrMibi11 13885128 13905062 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0624 1 1038 Core DNA Replication Machinery Family AT1G08840 53.203 0.0 1035