Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0623 ATGTCTTCCTTCTTCAGACCCCTCCTTGGAGATTACGCGGCTAAATTGGTAATTTCCCTTTTCCTTTCTTCTAATTTATTTCCTTCTTCGTTCTCGCCGGCTGTGATCAGACTCCGGCAGTCGACTTCTACATCCTTACCTTTTCGTTCAGTCTCTGGCTTTGTTCGATTTGATATTTTTGATCGCATTCGTTTTGCCTCTGCTTTTTATTTTTTTATTTTTGGTTTCGATCTGCCATTTATGCTTGAAATTTTTTGCATGATTGACCTGTTGTGGACTTGTGGTTGCGTTGGTGATGTGAGGATGATTGACTATGCTGTTAGGGAAGGGGAAACTTTGTCAAAGGGCAGACGTAGAATCCCTTTGCTGTTTGTCTCCAGATATTCCACTGTTCTCCCAAAAACAGTAACATTTATCAGAGCTTCTTCTTCTAACAGATCGTGGAAGGTTGATATTGAGGAAGAAGATGACAAAAGGTTGTACTTCAAAAATGGCTGGAAATCATTTGTGGAAGATAACTCTCTAAAGATTTCTTATCTTCTAGTTTTCAAATTTGATGGGCACTCAACTTTTAAAGTTGACATCTTTGGAACCTCTGCATGTGAGAGGGAGCTTGAGGATCAACCATGTAACAATCAGAGTTACTGCATACAACATTTTTATGTAACGACAACTCAAGATCGTCTAGAAACTCAGGAAGAATTTGATCCAATAAATGTTGTAGATCAACAAAAGTCGAATCTAAATGCCGAGACACCAATTGAGAGGATGGATCTTGATCAGGACAACTCTAACCAAGAAATTGAGGCTCCCCATAAGGAAGTTGAAGAACAAAGCTATGATGATCATCAGGACAACTCTAACCAAGAAATTGAGGCTTCCCATAAGGAAGTTGAAGAACAAAGCTATGATGATCATCAGGACCACTCTAACCAAGAAATTGAGGCTCCCCATAAGGAAGTTGAAGAACAAAGCTATGATTCTCATGGCCCAATCAGGAAAACTGCAGGCAACAATTATGAGGGACCAATGTATGACGAATCTAGTGATGAAGGCGCCAATTTGAGCTCTAAGAAGAATCCTACATTCAAAATTTATCTGCAACAAGCCTATGCAGAAAAGGGTGTTATGTGCTTTCCAACAGAGTTTTTCCAGAAGTATATGAAAAATAAGAGACAAGAGTTAGAGATTGAGACAGTAGAAGGAGTATGGACTGTGACATTACTCCCCCACATGAAAAGGACAAGGACATTCGCCAGATTAAGCAAAGGTTGGTCAGAATTTGCCAAAGCGAACCATTTCAAAACTGGAGAAACTCTAGTTTTTAAATTGGTTCGGAGAGGTGATCATCCCAAGTTTCTCGTTGATAGGCAGTGTTAG 1380 0.3971 MSSFFRPLLGDYAAKLVISLFLSSNLFPSSFSPAVIRLRQSTSTSLPFRSVSGFVRFDIFDRIRFASAFYFFIFGFDLPFMLEIFCMIDLLWTCGCVGDVRMIDYAVREGETLSKGRRRIPLLFVSRYSTVLPKTVTFIRASSSNRSWKVDIEEEDDKRLYFKNGWKSFVEDNSLKISYLLVFKFDGHSTFKVDIFGTSACERELEDQPCNNQSYCIQHFYVTTTQDRLETQEEFDPINVVDQQKSNLNAETPIERMDLDQDNSNQEIEAPHKEVEEQSYDDHQDNSNQEIEASHKEVEEQSYDDHQDHSNQEIEAPHKEVEEQSYDSHGPIRKTAGNNYEGPMYDESSDEGANLSSKKNPTFKIYLQQAYAEKGVMCFPTEFFQKYMKNKRQELEIETVEGVWTVTLLPHMKRTRTFARLSKGWSEFAKANHFKTGETLVFKLVRRGDHPKFLVDRQC 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0623 459 PANTHER B3 DOMAIN-CONTAINING 357 455 - -
Mibi11g0623 459 SMART B3_2 103 199 IPR003340 GO:0003677
Mibi11g0623 459 SMART B3_2 362 459 IPR003340 GO:0003677
Mibi11g0623 459 Gene3D - 107 201 IPR015300 -
Mibi11g0623 459 MobiDBLite consensus disorder prediction 273 357 - -
Mibi11g0623 459 CDD B3_DNA 363 457 IPR003340 GO:0003677
Mibi11g0623 459 Pfam B3 DNA binding domain 363 452 IPR003340 GO:0003677
Mibi11g0623 459 Pfam B3 DNA binding domain 113 196 IPR003340 GO:0003677
Mibi11g0623 459 ProSiteProfiles B3 DNA-binding domain profile. 362 458 IPR003340 GO:0003677
Mibi11g0623 459 ProSiteProfiles B3 DNA-binding domain profile. 103 199 IPR003340 GO:0003677
Mibi11g0623 459 Gene3D - 346 457 IPR015300 -
Mibi11g0623 459 CDD B3_DNA 107 196 IPR003340 GO:0003677
Mibi11g0623 459 SUPERFAMILY DNA-binding pseudobarrel domain 358 455 IPR015300 -
Mibi11g0623 459 MobiDBLite consensus disorder prediction 273 329 - -
Mibi11g0623 459 SUPERFAMILY DNA-binding pseudobarrel domain 113 201 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0623 Mibi-ChrMibi11 13852033 13856067 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0623 117 454 REM Transcription Factor Family AT4G33280 24.384 1.68e-13 70.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mibi11g0623 B3 6.7e-12 CL0405