Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0617 ATGGTTCTGAGTAGCGGGTTTTTCAGAGCTCATTTTGTCATTAGTGTGTCGCTGCTGCTTGGTATTAGTATCACCAATGGCACTCCTACTGATATTTTCTGCTTGAGAAGCATACAACAATCACTTGAAGATCCTTATAATTATTTGAAGTCTTCATGGAATTTCAATAATCAAACAGAAGGCTTTATCTGTCACTTTACTGGGGTTGAGTGTTGGCATGATGATGAGAACAGAGTGTTAAACCTCAAGCTGTCAAATATGGGACTCAAGGGTCAGTTTCCTCGTGCCATACAAAATTGCTCAAGCTTAACTGGATTGGATCTTTCTATCAACAAACTCTCTGGAACTATTCCAACCGATATTAATAAACTTCTTACTTTTGTGGTAACCCTGGACCTCTCATCAAATGACTTTTCAGGAGAGATCCCTGTGGACCTTGCTAATTGTTCCTATCTTAATACTCTTAAACTTGATCAAAATCGACTAACTGGTCAAATTCCTCCACAGCTTGCCCAGCTCGAACGGATTAAGACTTTTACTGTCACAAATAATTTTTTGACAGGGCCAGTTCCATCTTTTGCAAGCAAAGATGGTATTACAGCAGACAGTTATTCAAATAATTCAGGACTTTGTGGGGCTCCCTTGGATCCATGCCAAGGGAAGAAGGTTAACACTGCAGTTATAGCTGGTGCTGCTGTAGGTGGGATAATTGTTGCAGCATTAGCATTGGGTTTTGTGGCATTCTTCTTTGTACGCCGAGTCTCTGTGAAGAAGGAAGAGGACCCTGAAGGAAATAAATGGGCACGAAGTCTAAAGGGAACAAAAAGAATTAAGGTTTCTATGTTTGAAAAGTCAATTTCAAAAATGAAATTGAGCGATCTCATGAAGGCAACTAACAACTTCAGTAAAAGCAATATCATTGGCTCAGGAAGAACAGGGGCTATGTATAAAGCTGTCCTTGATGATGGTGGCACAGAGCTCATGGTTAAAAGATTGCAGGAATCTCAGTACTTAGAAAAGGAATTTGCATCTGAGATGGCTACATTGGGGACTGTAAGACATCGTAACTTGGTTTCCCTTTTAGGCTTTTGTGTGGCCAAACAGGAGAGGCTTTTGGTGTATAAATATATGGAAAACGGAAGCCTTCATGATCAGCTACATCCTGATACTGGTGGGAGCACTATGGAGTGGTCTTTAAGGCTAAAAATTGCAATTGGGGCAGCCAACGGATTAGCATGGCTTCATCATAGCTGCAATCCTCGTATTATCCACCGAAACATCAGCTCTAAGTGCATCTTGTTGGATGCAGATTTTGAGCCAAAAATTTCTGATTTTGGCCTTGCTAGATTGATGAATCCAATTGACACACATTTAAGTACTTTTGTAAATGGTGAGTTTGGAGATCTTGGTTATGTTGCTCCTGAATATACGAGAACTCTGGTGGCTACACCAAAAGGAGATGTCTATAGCTTCGGTACTGTGCTTCTAGAGTTGGTGACAGGCGAGAGGCCTACCCATGTGGCCAGAGCTCCTGAAACTTTCAAAGGAAATTTGGTGGAGTGGATTTCAACGCTTTCAAGCAAATCTGAACTCAAGGATGCTATTGATGAATCATTACTTGGGAAGGGTGATGATGGTGAGATTTTCCAATTTCTCAAGGTTGCATGCAACTGTGTTTCACCAAATCCAAAGGAAAGACCCACTATGTTTGAAGTGTACCAACTTCTTAGAGCAATTGGGAGCAGATACAATTTCACGACTGATGACGAGATATTGGTACCTACAGATACTGGTGATACTGCCAATTTCGACGAACTTATTGTCTCACGAGAAGAAAATAGTTGA 1845 0.4092 MVLSSGFFRAHFVISVSLLLGISITNGTPTDIFCLRSIQQSLEDPYNYLKSSWNFNNQTEGFICHFTGVECWHDDENRVLNLKLSNMGLKGQFPRAIQNCSSLTGLDLSINKLSGTIPTDINKLLTFVVTLDLSSNDFSGEIPVDLANCSYLNTLKLDQNRLTGQIPPQLAQLERIKTFTVTNNFLTGPVPSFASKDGITADSYSNNSGLCGAPLDPCQGKKVNTAVIAGAAVGGIIVAALALGFVAFFFVRRVSVKKEEDPEGNKWARSLKGTKRIKVSMFEKSISKMKLSDLMKATNNFSKSNIIGSGRTGAMYKAVLDDGGTELMVKRLQESQYLEKEFASEMATLGTVRHRNLVSLLGFCVAKQERLLVYKYMENGSLHDQLHPDTGGSTMEWSLRLKIAIGAANGLAWLHHSCNPRIIHRNISSKCILLDADFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYTRTLVATPKGDVYSFGTVLLELVTGERPTHVARAPETFKGNLVEWISTLSSKSELKDAIDESLLGKGDDGEIFQFLKVACNCVSPNPKERPTMFEVYQLLRAIGSRYNFTTDDEILVPTDTGDTANFDELIVSREENS 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0617 614 FunFam Nuclear pore complex protein NUP107 29 192 - -
Mibi11g0617 614 FunFam Leucine-rich repeat receptor-like protein kinase 377 587 - -
Mibi11g0617 614 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 47 194 - -
Mibi11g0617 614 ProSiteProfiles Protein kinase domain profile. 301 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g0617 614 CDD TM_EGFR-like 228 259 - -
Mibi11g0617 614 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 262 376 - -
Mibi11g0617 614 Gene3D Phosphorylase Kinase; domain 1 262 376 - -
Mibi11g0617 614 SUPERFAMILY Protein kinase-like (PK-like) 279 576 IPR011009 -
Mibi11g0617 614 SUPERFAMILY L domain-like 29 193 - -
Mibi11g0617 614 Pfam Protein kinase domain 302 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g0617 614 Gene3D Ribonuclease Inhibitor 31 220 IPR032675 -
Mibi11g0617 614 Gene3D Transferase(Phosphotransferase) domain 1 377 593 - -
Mibi11g0617 614 CDD STKc_IRAK 307 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0617 Mibi-ChrMibi11 13655894 13658397 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0617 23 590 Receptor kinase-like Gene Family AT3G28450 48.873 0.0 533
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Mibi11g0617 Pkinase 7.8e-39 CL0016