Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0560 ATGGAAAACGACTTCTTCCTAAATTCTTCACCTCTCCACTTCGATCCTCCTTCCTCTTCTTCTCCTTCAATGCCTACGTGGCACTCCTCCGCCATGGACATTCCACTTTCCTCTCAGCAACAACCTCAACAACAACAACAACAAGACTCTTTCTACAACCCCACATGGGAAAAGTCAAACCTAGATCATCACAATCTTCATCATCATCATCATCATAGTCATAATCCTCTTCAGTTTGATTCTGCTTTGAGTTCGATGGTTTCTTCTCCGGCGGCTTCCAATTCCAATTTGTCGAATGAGAATTTCATGATCAGAGAATTGATTGGGAAATTGGGTAACATTGGGAATAATTCAAGCGAGATCGCATCTTACATGAATGGAAATAACAACAGTACCAACACTTCATGTTATAGTACGCCTTTGAGTTCTCCTCCTAAATTGAACATTCCTCATCCATTGATAAATAATAATAATAACCATCAGTCGGTGAAAGATAAATTACCAATGGCTTTGAATTCCAGTGTCGCTGAATTCTCAGCTGATCCTGGTTTTGCTGAGAGAGCTGCCAAGTTTTCTTGCTTTGGAAGTAGGAGTTTTAATGGTGGGAGTTCAAGGCAAGTTGGGATGAGTAATAATGCTGAGTTTACTCAGAGATCTAGTATGTTAATGGAGAATGGAAAGCTTTCTAGAGTTTCAAGTAGTCCATCCCTGAAAGCGCTTGGATCTCAAATGGAGAATAAGAATTCTCCTTTGAATTCTCAGGAGGAATCTACAATCTCTGAGCAAAACCCAAATGCTGAATCTGGGGTGAAACCTTCCCCTCCTGATTTGAGTTCCAGAAAGAGGAAAGCTTCTTCAAAGGGAAAATCCAAAGAACACCCTCCCAAGGCTGCAGAAGCTAATGAAGATTCTAGTACAAAACGCAGCAAGCCAAATGAAGGGGAAGGACATGAAAACGGCCAAGTGAAGGGAGAAGAAGAGACAAAAGGAGGTCACAACAATGGAGGGGATGAGAAACAGAGCAAGAGCAACAACTCAAAACCTCCTGAACCTCCAAAGGACTACATTCATGTCAGAGCAAGAAGAGGTCAAGCTACTGATAGCCATAGTCTTGCTGAAAGAGTAAGGAGGGAGAAAATCAGCGAGAGAATGAAGCTTCTGCAAGATCTTGTGCCTGGTTGCAATAAGGTCACTGGAAAAGCTCTTATGCTTGATGAAATCATAAACTATGTACAGTCATTGCAGCGTCAAGTTGAGTTCCTTTCTATGAAATTGGCCTCGGTGAACACCAGGCTTGATGTGAGCATTGACAATCTCATCTCAAAAGATATATTTCAATCTACTAACTCTATGGCACACCAAGCAGCAATATTCCCCTTAGATTCCTCTGCCACAGCCTTTTATGGCCCCAACCCAGCAATTCAAAATTCAATCCCTAATGGAACTGCGAACCACTCAATGGAATCTTTAGATTCTGCTCTTTGCCAAAGCCTTGGCTTCCAGTTACCGCCTCTGAATGGTTTCAATGAAGGTGCTTCTCAGTATCCAATGACTTTTTGTGAGGAGGACCTTCACGCCATTGTTCAGATGGGGTTTGGTCAAACAGAAAATAGAAAAACACCAACCCAATCTCCAAGCTTTAATGGTTCAAACCAGCTATCCCATATGAAAGTTGAGCTCTGA 1683 0.4207 MENDFFLNSSPLHFDPPSSSSPSMPTWHSSAMDIPLSSQQQPQQQQQQDSFYNPTWEKSNLDHHNLHHHHHHSHNPLQFDSALSSMVSSPAASNSNLSNENFMIRELIGKLGNIGNNSSEIASYMNGNNNSTNTSCYSTPLSSPPKLNIPHPLINNNNNHQSVKDKLPMALNSSVAEFSADPGFAERAAKFSCFGSRSFNGGSSRQVGMSNNAEFTQRSSMLMENGKLSRVSSSPSLKALGSQMENKNSPLNSQEESTISEQNPNAESGVKPSPPDLSSRKRKASSKGKSKEHPPKAAEANEDSSTKRSKPNEGEGHENGQVKGEEETKGGHNNGGDEKQSKSNNSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLDVSIDNLISKDIFQSTNSMAHQAAIFPLDSSATAFYGPNPAIQNSIPNGTANHSMESLDSALCQSLGFQLPPLNGFNEGASQYPMTFCEEDLHAIVQMGFGQTENRKTPTQSPSFNGSNQLSHMKVEL 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0560 560 MobiDBLite consensus disorder prediction 227 269 - -
Mibi11g0560 560 MobiDBLite consensus disorder prediction 1 77 - -
Mibi11g0560 560 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 364 414 IPR011598 GO:0046983
Mibi11g0560 560 MobiDBLite consensus disorder prediction 290 336 - -
Mibi11g0560 560 Gene3D - 361 437 IPR036638 GO:0046983
Mibi11g0560 560 MobiDBLite consensus disorder prediction 1 59 - -
Mibi11g0560 560 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 249 465 IPR024097 GO:0006355
Mibi11g0560 560 SMART finulus 370 420 IPR011598 GO:0046983
Mibi11g0560 560 Pfam Helix-loop-helix DNA-binding domain 368 415 IPR011598 GO:0046983
Mibi11g0560 560 MobiDBLite consensus disorder prediction 536 560 - -
Mibi11g0560 560 CDD bHLH_AtBPE_like 354 439 - -
Mibi11g0560 560 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 362 432 IPR036638 GO:0046983
Mibi11g0560 560 Coils Coil 411 431 - -
Mibi11g0560 560 MobiDBLite consensus disorder prediction 227 355 - -
Mibi11g0560 560 FunFam Basic helix-loop-helix transcription factor 361 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0560 Mibi-ChrMibi11 11468907 11471578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0560 1 514 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 44.972 5.58e-108 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi11g0560 HLH 4.4e-06 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi11g0560 11 11468907 11471578 Mibi04g1664 04 44821722 44824264 CCT